ENSG00000095627


Homo sapiens

Features
Gene ID: ENSG00000095627
  
Biological name :TDRD1
  
Synonyms : Q9BXT4 / TDRD1 / tudor domain containing 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q25.3
Gene start: 114179270
Gene end: 114232304
  
Corresponding Affymetrix probe sets: 221018_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358288
Ensembl peptide - ENSP00000251864
Ensembl peptide - ENSP00000358286
NCBI entrez gene - 56165     See in Manteia.
OMIM - 605796
RefSeq - XM_017016415
RefSeq - XM_011539962
RefSeq - XM_011539963
RefSeq - XM_011539964
RefSeq - XM_011539966
RefSeq - XM_017016414
RefSeq - NM_198795
RefSeq - XM_005269978
RefSeq - XM_005269979
RefSeq - XM_011539959
RefSeq - XM_011539960
RefSeq - XM_011539961
RefSeq Peptide - NP_942090
swissprot - H9KV62
swissprot - H9KV63
swissprot - A0A140VJW6
swissprot - Q9BXT4
Ensembl - ENSG00000095627
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdrd1ENSDARG00000007465Danio rerio
 TDRD1ENSGALG00000046180Gallus gallus
 Tdrd1ENSMUSG00000025081Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF17 / Q9BXT8 / ring finger protein 17ENSG0000013297220
TDRD6 / O60522 / tudor domain containing 6ENSG0000018011318
B5MCY1 / TDRD15 / tudor domain containing 15ENSG0000021881917
TDRD5 / Q8NAT2 / tudor domain containing 5ENSG0000016278210
TDRKH / Q9Y2W6 / tudor and KH domain containingENSG000001821347


Protein motifs (from Interpro)
Interpro ID Name
 IPR002893  Zinc finger, MYND-type
 IPR002999  Tudor domain
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007281 germ cell development ISS
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0031047 gene silencing by RNA ISS
 biological_processGO:0034587 piRNA metabolic process ISS
 biological_processGO:0043046 DNA methylation involved in gamete generation ISS
 biological_processGO:0051321 meiotic cell cycle IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0033391 chromatoid body IEA
 cellular_componentGO:0043186 P granule ISS
 cellular_componentGO:0071546 pi-body ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
PIWI-interacting RNA (piRNA) biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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