ENSG00000132972


Homo sapiens

Features
Gene ID: ENSG00000132972
  
Biological name :RNF17
  
Synonyms : Q9BXT8 / ring finger protein 17 / RNF17
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q12.12
Gene start: 24764152
Gene end: 24879921
  
Corresponding Affymetrix probe sets: 220270_at (Human Genome U133 Plus 2.0 Array)   221033_s_at (Human Genome U133 Plus 2.0 Array)   224383_at (Human Genome U133 Plus 2.0 Array)   224384_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000255324
Ensembl peptide - ENSP00000255325
Ensembl peptide - ENSP00000344776
Ensembl peptide - ENSP00000388892
NCBI entrez gene - 56163     See in Manteia.
OMIM - 605793
RefSeq - XM_017020676
RefSeq - NM_001184993
RefSeq - NM_031277
RefSeq - XM_011535159
RefSeq - XM_011535160
RefSeq - XM_011535162
RefSeq - XM_011535163
RefSeq - XM_011535164
RefSeq - XM_006719846
RefSeq - XM_006719849
RefSeq - XM_006719852
RefSeq - XM_011535152
RefSeq - XM_011535155
RefSeq - XM_011535156
RefSeq - XM_011535157
RefSeq - XM_011535158
RefSeq Peptide - NP_112567
RefSeq Peptide - NP_001171922
swissprot - Q5T2J8
swissprot - Q5T6R1
swissprot - Q9BXT8
Ensembl - ENSG00000132972
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf17ENSDARG00000056387Danio rerio
 ENSGALG00000045414Gallus gallus
 Rnf17ENSMUSG00000000365Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TDRD1 / Q9BXT4 / tudor domain containing 1ENSG0000009562715
TDRD6 / O60522 / tudor domain containing 6ENSG0000018011315
B5MCY1 / TDRD15 / tudor domain containing 15ENSG0000021881912
TDRD5 / Q8NAT2 / tudor domain containing 5ENSG000001627828
TDRKH / Q9Y2W6 / tudor and KH domain containingENSG000001821344


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002999  Tudor domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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