ENSG00000180113


Homo sapiens

Features
Gene ID: ENSG00000180113
  
Biological name :TDRD6
  
Synonyms : O60522 / TDRD6 / tudor domain containing 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p12.3
Gene start: 46687875
Gene end: 46704319
  
Corresponding Affymetrix probe sets: 232692_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000397165
Ensembl peptide - ENSP00000346065
Ensembl peptide - ENSP00000443299
NCBI entrez gene - 221400     See in Manteia.
OMIM - 611200
RefSeq - NM_001168359
RefSeq - NM_001010870
RefSeq Peptide - NP_001010870
RefSeq Peptide - NP_001161831
swissprot - O60522
swissprot - H0Y590
Ensembl - ENSG00000180113
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-189e2.3ENSDARG00000089954Danio rerio
 tdrd6ENSDARG00000070052Danio rerio
 ENSGALG00000044279Gallus gallus
 Tdrd6ENSMUSG00000040140Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B5MCY1 / TDRD15 / tudor domain containing 15ENSG0000021881922
RNF17 / Q9BXT8 / ring finger protein 17ENSG0000013297212
TDRD1 / Q9BXT4 / tudor domain containing 1ENSG0000009562710
TDRD5 / Q8NAT2 / tudor domain containing 5ENSG000001627827
TDRKH / Q9Y2W6 / tudor and KH domain containingENSG000001821344


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0033391 chromatoid body ISS


Pathways (from Reactome)
Pathway description
PIWI-interacting RNA (piRNA) biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000125207 PIWIL1 / Q96J94 / piwi like RNA-mediated gene silencing 1  / complex
 ENSG00000182134 TDRKH / Q9Y2W6 / tudor and KH domain containing  / complex
 ENSG00000162639 HENMT1 / Q5T8I9 / HEN methyltransferase 1  / reaction






 

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