ENSDARG00000089954


Danio rerio

Features
Gene ID: ENSDARG00000089954
  
Biological name :si:ch211-189e2.3
  
Synonyms : si:ch211-189e2.3
  
Possible biological names infered from orthology : O60522 / TDRD6 / tudor domain containing 6 / tudor domain-containing protein 6 isoform 3
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 6603691
Gene end: 6641548
  
Corresponding Affymetrix probe sets: Dr.14838.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000150080
Ensembl peptide - ENSDARP00000155558
Ensembl peptide - ENSDARP00000127821
Ensembl peptide - ENSDARP00000144434
NCBI entrez gene - 100536102     See in Manteia.
RefSeq - XM_021473057
swissprot - A0A286YB87
swissprot - X1WC78
ZFIN ID - ZDB-GENE-030131-6454
Ensembl - ENSDARG00000089954
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000044279Gallus gallus
 TDRD6ENSG00000180113Homo sapiens
 Tdrd6ENSMUSG00000040140Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tdrd6 / tudor domain containing 6 / O60522* / tudor domain-containing protein 6 isoform 3 *ENSDARG0000007005225
si:dkeyp-93d12.1 / B5MCY1* / TDRD15* / tudor domain containing 15*ENSDARG0000001403914
rnf17 / ring finger protein 17 / Q99MV7* / Q9BXT8*ENSDARG000000563877
tdrd1 / tudor domain containing 1 / Q99MV1* / Q9BXT4* / Tudor domain-containing protein 1 *ENSDARG000000074655
tdrd5 / Q1L981 / tudor domain containing 5 / Q8NAT2* / Q5VCS6* / Tudor domain-containing protein 5 *ENSDARG000000714502
tdrkh / tudor and KH domain containing / Q80VL1* / Q9Y2W6* / Mus musculus tudor and KH domain containing protein (Tdrkh), transcript variant 4, mRNA.*ENSDARG000000534742


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr