ENSDARG00000071450


Danio rerio

Features
Gene ID: ENSDARG00000071450
  
Biological name :tdrd5
  
Synonyms : Q1L981 / tdrd5 / tudor domain containing 5
  
Possible biological names infered from orthology : Q5VCS6 / Q8NAT2 / Tudor domain-containing protein 5
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 17261801
Gene end: 17280853
  
Corresponding Affymetrix probe sets: Dr.17442.1.A1_at (Zebrafish Array)   NM_001044850_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000122775
Ensembl peptide - ENSDARP00000151301
Ensembl peptide - ENSDARP00000151602
Ensembl peptide - ENSDARP00000156596
NCBI entrez gene - 557999     See in Manteia.
RefSeq - NM_001044850
RefSeq - XM_021469333
RefSeq Peptide - NP_001038315
swissprot - Q1L981
ZFIN ID - ZDB-GENE-050208-502
Ensembl - ENSDARG00000071450
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TDRD5ENSGALG00000033634Gallus gallus
 TDRD5ENSG00000162782Homo sapiens
 Tdrd5ENSMUSG00000060985Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tdrd1 / tudor domain containing 1 / Q99MV1* / Q9BXT4* / Tudor domain-containing protein 1 *ENSDARG0000000746510
si:dkeyp-93d12.1 / B5MCY1* / TDRD15* / tudor domain containing 15*ENSDARG0000001403910
tdrd6 / tudor domain containing 6 / O60522* / tudor domain-containing protein 6 isoform 3 *ENSDARG0000007005210
rnf17 / ring finger protein 17 / Q99MV7* / Q9BXT8*ENSDARG000000563879
tdrkh / tudor and KH domain containing / Q80VL1* / Q9Y2W6* / Mus musculus tudor and KH domain containing protein (Tdrkh), transcript variant 4, mRNA.*ENSDARG000000534749
si:ch211-189e2.3 / TDRD6* / O60522* / tudor domain containing 6* / tudor domain-containing protein 6 isoform 3 *ENSDARG000000899545


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR025605  OST-HTH/LOTUS domain
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007281 germ cell development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007286 spermatid development ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030719 P granule organization ISS
 biological_processGO:0043046 DNA methylation involved in gamete generation ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0033391 chromatoid body ISS
 cellular_componentGO:0071546 pi-body ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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