ENSDARG00000070052


Danio rerio

Features
Gene ID: ENSDARG00000070052
  
Biological name :tdrd6
  
Synonyms : tdrd6 / tudor domain containing 6
  
Possible biological names infered from orthology : O60522 / tudor domain-containing protein 6 isoform 3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 35438300
Gene end: 35462226
  
Corresponding Affymetrix probe sets: Dr.15499.1.A1_at (Zebrafish Array)   XM_688932_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000093281
Ensembl peptide - ENSDARP00000112268
Ensembl peptide - ENSDARP00000127242
NCBI entrez gene - 565665     See in Manteia.
RefSeq - XM_688932
swissprot - F1R237
swissprot - U3JAH4
ZFIN ID - ZDB-GENE-041001-210
Ensembl - ENSDARG00000070052
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000044279Gallus gallus
 TDRD6ENSG00000180113Homo sapiens
 Tdrd6ENSMUSG00000040140Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-189e2.3 / TDRD6* / O60522* / tudor domain containing 6* / tudor domain-containing protein 6 isoform 3 *ENSDARG0000008995421
si:dkeyp-93d12.1 / B5MCY1* / TDRD15* / tudor domain containing 15*ENSDARG0000001403917
rnf17 / ring finger protein 17 / Q99MV7* / Q9BXT8*ENSDARG0000005638710
tdrd1 / tudor domain containing 1 / Q99MV1* / Q9BXT4* / Tudor domain-containing protein 1 *ENSDARG000000074659
tdrkh / tudor and KH domain containing / Q80VL1* / Q9Y2W6* / Mus musculus tudor and KH domain containing protein (Tdrkh), transcript variant 4, mRNA.*ENSDARG000000534744
tdrd5 / Q1L981 / tudor domain containing 5 / Q8NAT2* / Q5VCS6* / Tudor domain-containing protein 5 *ENSDARG000000714504


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr