ENSG00000167281


Homo sapiens

Features
Gene ID: ENSG00000167281
  
Biological name :RBFOX3
  
Synonyms : A6NFN3 / RBFOX3 / RNA binding fox-1 homolog 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.3
Gene start: 79089345
Gene end: 79516148
  
Corresponding Affymetrix probe sets: 229406_at (Human Genome U133 Plus 2.0 Array)   235468_at (Human Genome U133 Plus 2.0 Array)   240975_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467872
Ensembl peptide - ENSP00000465367
Ensembl peptide - ENSP00000468693
Ensembl peptide - ENSP00000462007
Ensembl peptide - ENSP00000463653
Ensembl peptide - ENSP00000463964
Ensembl peptide - ENSP00000464186
Ensembl peptide - ENSP00000464946
NCBI entrez gene - 146713     See in Manteia.
OMIM - 616999
RefSeq - XM_017024211
RefSeq - XM_011524362
RefSeq - XM_011524363
RefSeq - XM_011524365
RefSeq - XM_011524366
RefSeq - XM_011524367
RefSeq - XM_017024208
RefSeq - XM_017024209
RefSeq - XM_017024210
RefSeq - NM_001082575
RefSeq - XM_011524359
RefSeq - XM_011524360
RefSeq Peptide - NP_001076044
RefSeq Peptide - NP_001337382
swissprot - K7EJX6
swissprot - K7EQK7
swissprot - J3QQZ2
swissprot - A6NFN3
swissprot - K7ESF7
swissprot - J3QRF4
Ensembl - ENSG00000167281
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbfox3aENSDARG00000010083Danio rerio
 rbfox3bENSDARG00000074310Danio rerio
 RBFOX3ENSGALG00000032889Gallus gallus
 Q8BIF2ENSMUSG00000025576Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9NWB1 / RBFOX1 / RNA binding fox-1 homolog 1ENSG0000007832876
O43251 / RBFOX2 / RNA binding fox-1 homolog 2ENSG0000010032068


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR017325  RNA binding protein Fox-1
 IPR025670  Fox-1 C-terminal domain
 IPR034237  FOX1, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007399 nervous system development IBA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0043484 regulation of RNA splicing IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0043204 perikaryon IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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