ENSG00000169249


Homo sapiens

Features
Gene ID: ENSG00000169249
  
Biological name :ZRSR2
  
Synonyms : Q15696 / zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 / ZRSR2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: p22.2
Gene start: 15790472
Gene end: 15823260
  
Corresponding Affymetrix probe sets: 208174_x_at (Human Genome U133 Plus 2.0 Array)   213876_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000369664
Ensembl peptide - ENSP00000303015
NCBI entrez gene - 8233     See in Manteia.
OMIM - 300028
RefSeq - XM_017029883
RefSeq - NM_005089
RefSeq - XM_011545590
RefSeq - XM_017029881
RefSeq - XM_017029882
RefSeq - XM_005274597
RefSeq - XM_011545589
RefSeq Peptide - NP_005080
swissprot - Q15696
swissprot - A6NDW0
Ensembl - ENSG00000169249
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zrsr2ENSDARG00000058448Danio rerio
 ZRSR2ENSGALG00000016552Gallus gallus
 Zrsr2ENSMUSG00000031370Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
U2AF1 / Q01081 / U2 small nuclear RNA auxiliary factor 1ENSG0000016020117
P0DN76 / U2AF1L5 / U2 small nuclear RNA auxiliary factor 1 like 5ENSG0000027589517
Q8WU68 / U2AF1L4 / U2 small nuclear RNA auxiliary factor 1 like 4ENSG0000016126512
AD000671.2ENSG000002671206


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000571  Zinc finger, CCCH-type
 IPR003954  RNA recognition motif domain, eukaryote
 IPR009145  U2 auxiliary factor small subunit
 IPR035979  RNA-binding domain superfamily
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IMP
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IC
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IDA
 cellular_componentGO:0089701 U2AF IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030628 pre-mRNA 3"-splice site binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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