ENSMUSG00000031370


Mus musculus

Features
Gene ID: ENSMUSG00000031370
  
Biological name :Zrsr2
  
Synonyms : zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 / Zrsr2
  
Possible biological names infered from orthology : Q15696
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: F5
Gene start: 163935443
Gene end: 163958661
  
Corresponding Affymetrix probe sets: 10607724 (MoGene1.0st)   1421128_at (Mouse Genome 430 2.0 Array)   1442154_at (Mouse Genome 430 2.0 Array)   1455727_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000088350
Ensembl peptide - ENSMUSP00000122747
Ensembl peptide - ENSMUSP00000120257
Ensembl peptide - ENSMUSP00000107908
NCBI entrez gene - 22184     See in Manteia.
MGI - MGI:103287
RefSeq - XM_006528796
RefSeq - NM_009453
RefSeq - NM_178794
RefSeq - XM_006528795
RefSeq Peptide - NP_848909
RefSeq Peptide - NP_033479
swissprot - B1B0F1
swissprot - B1B0E9
swissprot - B1B0E8
swissprot - B1B0F0
Ensembl - ENSMUSG00000031370
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zrsr2ENSDARG00000058448Danio rerio
 ZRSR2ENSGALG00000016552Gallus gallus
 ZRSR2ENSG00000169249Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zrsr1 / Q64707 / zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1ENSMUSG0000004406858
U2af1 / Q9D883 / U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 / P0DN76* / U2AF1L5* / U2 small nuclear RNA auxiliary factor 1 like 5*ENSMUSG0000006161316
Q8BGJ9 / U2af1l4 / Splicing factor U2AF 26 kDa subunit / Q8WU68* / AD000671.2* / U2 small nuclear RNA auxiliary factor 1 like 4*ENSMUSG0000010937814
Q8BGJ9 / U2af1l4 / U2 small nuclear RNA auxiliary factor 1-like 4 / Q8WU68* / AD000671.2*ENSMUSG0000007876514


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000571  Zinc finger, CCCH-type
 IPR003954  RNA recognition motif domain, eukaryote
 IPR009145  U2 auxiliary factor small subunit
 IPR035979  RNA-binding domain superfamily
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 cellular_componentGO:0089701 U2AF IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030628 pre-mRNA 3"-splice site binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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