ENSMUSG00000044068


Mus musculus

Features
Gene ID: ENSMUSG00000044068
  
Biological name :Zrsr1
  
Synonyms : Q64707 / zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 / Zrsr1
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: A3.2
Gene start: 22972005
Gene end: 22976496
  
Corresponding Affymetrix probe sets: 10374560 (MoGene1.0st)   1449354_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000062025
NCBI entrez gene - 22183     See in Manteia.
MGI - MGI:98885
RefSeq - NM_011663
RefSeq Peptide - NP_035793
swissprot - Q64707
swissprot - Q793C9
Ensembl - ENSMUSG00000044068
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zrsr2ENSDARG00000058448Danio rerio
 ZRSR2ENSGALG00000016552Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zrsr2 / zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 / Q15696*ENSMUSG0000003137073
U2af1 / Q9D883 / U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 / P0DN76* / U2AF1L5* / U2 small nuclear RNA auxiliary factor 1 like 5*ENSMUSG0000006161317
Q8BGJ9 / U2af1l4 / U2 small nuclear RNA auxiliary factor 1-like 4 / Q8WU68* / AD000671.2*ENSMUSG0000007876516
Q8BGJ9 / U2af1l4 / Splicing factor U2AF 26 kDa subunit / Q8WU68* / AD000671.2* / U2 small nuclear RNA auxiliary factor 1 like 4*ENSMUSG0000010937816


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000571  Zinc finger, CCCH-type
 IPR003954  RNA recognition motif domain, eukaryote
 IPR009145  U2 auxiliary factor small subunit
 IPR035979  RNA-binding domain superfamily
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IBA
 cellular_componentGO:0089701 U2AF IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030628 pre-mRNA 3"-splice site binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Twist1tm1Bhr/Twist1+,Twist2tm1(cre)Dor/Twist2+
Genetic Background: involves: 129/Sv * 129X1/SvJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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