ENSG00000172322


Homo sapiens

Features
Gene ID: ENSG00000172322
  
Biological name :CLEC12A
  
Synonyms : CLEC12A / C-type lectin domain family 12 member A / Q5QGZ9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p13.31
Gene start: 9951316
Gene end: 9995694
  
Corresponding Affymetrix probe sets: 1552398_a_at (Human Genome U133 Plus 2.0 Array)   1569401_at (Human Genome U133 Plus 2.0 Array)   243106_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000302804
Ensembl peptide - ENSP00000347916
Ensembl peptide - ENSP00000379764
Ensembl peptide - ENSP00000405244
Ensembl peptide - ENSP00000345448
NCBI entrez gene - 160364     See in Manteia.
OMIM - 612088
RefSeq - XM_011520573
RefSeq - NM_001207010
RefSeq - NM_001300730
RefSeq - NM_138337
RefSeq - NM_201623
RefSeq - XM_005253324
RefSeq - XM_006719033
RefSeq - XM_006719035
RefSeq - XM_006719036
RefSeq - XM_011520570
RefSeq - XM_011520571
RefSeq Peptide - NP_001193939
RefSeq Peptide - NP_001287659
RefSeq Peptide - NP_612210
RefSeq Peptide - NP_963917
swissprot - Q5QGZ9
swissprot - A8MVL9
Ensembl - ENSG00000172322
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Clec12aENSMUSG00000053063Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q2HXU8 / CLEC12B / C-type lectin domain family 12 member BENSG0000025666032
CLEC1A / Q8NC01 / C-type lectin domain family 1 member AENSG0000015004829
OLR1 / P78380 / oxidized low density lipoprotein receptor 1ENSG0000017339124
CLEC1B / Q9P126 / C-type lectin domain family 1 member BENSG0000016568223
CLEC7A / Q9BXN2 / C-type lectin domain containing 7AENSG0000017224323
CLEC9A / Q6UXN8 / C-type lectin domain containing 9AENSG0000019799222


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR033992  Natural killer cell receptor-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043312 neutrophil degranulation TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0070821 tertiary granule membrane TAS
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr