ENSG00000165682


Homo sapiens

Features
Gene ID: ENSG00000165682
  
Biological name :CLEC1B
  
Synonyms : CLEC1B / C-type lectin domain family 1 member B / Q9P126
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: p13.2
Gene start: 9985642
Gene end: 10013424
  
Corresponding Affymetrix probe sets: 220496_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000298527
Ensembl peptide - ENSP00000327169
Ensembl peptide - ENSP00000381910
Ensembl peptide - ENSP00000406338
NCBI entrez gene - 51266     See in Manteia.
OMIM - 606783
RefSeq - XM_017019396
RefSeq - NM_001099431
RefSeq - NM_016509
RefSeq - XM_005253382
RefSeq - XM_011520685
RefSeq - XM_011520686
RefSeq - XM_017019395
RefSeq Peptide - NP_001092901
RefSeq Peptide - NP_057593
swissprot - Q9P126
swissprot - H7BYT7
Ensembl - ENSG00000165682
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Clec1bENSMUSG00000030159Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q2HXU8 / CLEC12B / C-type lectin domain family 12 member BENSG0000025666033
CLEC1A / Q8NC01 / C-type lectin domain family 1 member AENSG0000015004831
Q5QGZ9 / CLEC12A / C-type lectin domain family 12 member AENSG0000017232228
CLEC7A / Q9BXN2 / C-type lectin domain containing 7AENSG0000017224327
OLR1 / P78380 / oxidized low density lipoprotein receptor 1ENSG0000017339124
CLEC9A / Q6UXN8 / C-type lectin domain containing 9AENSG0000019799223


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR033992  Natural killer cell receptor-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006952 defense response TAS
 biological_processGO:0007166 cell surface receptor signaling pathway TAS
 biological_processGO:0023014 signal transduction by protein phosphorylation IDA
 biological_processGO:0030168 platelet activation TAS
 biological_processGO:0030220 platelet formation IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
GPVI-mediated activation cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000165025 SYK / P43405 / spleen associated tyrosine kinase  / complex / reaction
 ENSG00000162493 PDPN / Q86YL7 / podoplanin  / reaction / complex
 ENSG00000165682 CLEC1B / Q9P126 / C-type lectin domain family 1 member B  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr