ENSG00000185811


Homo sapiens

Features
Gene ID: ENSG00000185811
  
Biological name :IKZF1
  
Synonyms : IKAROS family zinc finger 1 / IKZF1 / Q13422
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: p12.2
Gene start: 50304068
Gene end: 50405101
  
Corresponding Affymetrix probe sets: 1565817_at (Human Genome U133 Plus 2.0 Array)   1565818_s_at (Human Genome U133 Plus 2.0 Array)   205038_at (Human Genome U133 Plus 2.0 Array)   205039_s_at (Human Genome U133 Plus 2.0 Array)   216901_s_at (Human Genome U133 Plus 2.0 Array)   220704_at (Human Genome U133 Plus 2.0 Array)   227344_at (Human Genome U133 Plus 2.0 Array)   227346_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000493696
Ensembl peptide - ENSP00000483016
Ensembl peptide - ENSP00000494055
Ensembl peptide - ENSP00000496655
Ensembl peptide - ENSP00000496453
Ensembl peptide - ENSP00000494180
Ensembl peptide - ENSP00000331614
Ensembl peptide - ENSP00000340080
Ensembl peptide - ENSP00000342485
Ensembl peptide - ENSP00000342750
Ensembl peptide - ENSP00000349928
Ensembl peptide - ENSP00000352123
Ensembl peptide - ENSP00000388478
Ensembl peptide - ENSP00000396554
Ensembl peptide - ENSP00000401507
Ensembl peptide - ENSP00000409588
Ensembl peptide - ENSP00000413025
Ensembl peptide - ENSP00000478368
NCBI entrez gene - 10320     See in Manteia.
OMIM - 603023
RefSeq - XM_017011670
RefSeq - XM_011515058
RefSeq - XM_011515059
RefSeq - XM_011515060
RefSeq - XM_011515061
RefSeq - XM_011515062
RefSeq - XM_011515063
RefSeq - XM_011515064
RefSeq - XM_011515065
RefSeq - XM_011515066
RefSeq - XM_011515067
RefSeq - XM_011515068
RefSeq - XM_011515069
RefSeq - XM_011515070
RefSeq - XM_011515071
RefSeq - XM_011515072
RefSeq - XM_011515073
RefSeq - XM_011515074
RefSeq - XM_011515075
RefSeq - XM_011515076
RefSeq - XM_011515077
RefSeq - XM_011515078
RefSeq - XM_017011667
RefSeq - XM_017011668
RefSeq - XM_017011669
RefSeq - NM_001220765
RefSeq - NM_001220767
RefSeq - NM_001220768
RefSeq - NM_001220770
RefSeq - NM_001220771
RefSeq - NM_001291837
RefSeq - NM_001291838
RefSeq - NM_001291839
RefSeq - NM_001291840
RefSeq - NM_001291841
RefSeq - NM_001291842
RefSeq - NM_001291843
RefSeq - NM_001291844
RefSeq - NM_001291845
RefSeq - NM_001291846
RefSeq - NM_001291847
RefSeq - NM_006060
RefSeq Peptide - NP_001207699
RefSeq Peptide - NP_001278774
RefSeq Peptide - NP_001278775
RefSeq Peptide - NP_001278776
RefSeq Peptide - NP_006051
RefSeq Peptide - NP_001207694
RefSeq Peptide - NP_001207696
RefSeq Peptide - NP_001207697
RefSeq Peptide - NP_001207700
RefSeq Peptide - NP_001278766
RefSeq Peptide - NP_001278767
RefSeq Peptide - NP_001278768
RefSeq Peptide - NP_001278769
RefSeq Peptide - NP_001278770
RefSeq Peptide - NP_001278771
RefSeq Peptide - NP_001278772
RefSeq Peptide - NP_001278773
swissprot - A0A0A0MST1
swissprot - A0A0A0MRA0
swissprot - R9R4D9
swissprot - A0A087WU46
swissprot - C9JTB0
swissprot - Q13422
swissprot - Q3T907
Ensembl - ENSG00000185811
  
Related genetic diseases (OMIM): 616873 - Immunodeficiency, common variable, 13, 616873

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ikzf1ENSDARG00000013539Danio rerio
 IKZF1ENSGALG00000013086Gallus gallus
 Ikzf1ENSMUSG00000018654Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IKZF3 / Q9UKT9 / IKAROS family zinc finger 3ENSG0000016140553
IKZF2 / Q9UKS7 / IKAROS family zinc finger 2ENSG0000003041951
IKZF4 / Q9H2S9 / IKAROS family zinc finger 4ENSG0000012341149
IKZF5 / Q9H5V7 / IKAROS family zinc finger 5ENSG0000009557419


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007498 mesoderm development TAS
 biological_processGO:0030098 lymphocyte differentiation IMP
 biological_processGO:0030218 erythrocyte differentiation IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0051291 protein heterooligomerization IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0031618 nuclear pericentric heterochromatin IDA
 cellular_componentGO:0032991 protein-containing complex IMP
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000505 Impaired vision 
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 HP:0000509 Conjunctivitis "Inflammation of the conjunctiva." [HPO:curators]
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000621 Entropion "An abnormal turning inward of the upper and/or lower eyelid." [HPO:sdoelken]
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 HP:0000795 Abnormality of the urethra "An abnormality of the urethra, i.e., of the tube which connects the urinary bladder to the outside of the body." [HPO:curators]
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 HP:0001637 Abnormality of the myocardium 
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 HP:0001645 Sudden cardiac death 
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 HP:0001658 Myocardial infarction 
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 HP:0001733 Pancreatitis 
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 HP:0001824 Weight loss 
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 HP:0001873 Thrombocytopenia 
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 HP:0001874 Abnormality of neutrophil 
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 HP:0001876 Pancytopenia 
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 HP:0001903 Anemia 
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 HP:0001945 Fever 
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 HP:0001960 Hypokalemic metabolic alkalosis 
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 HP:0002014 Diarrhea 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002017 Nausea and vomiting 
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 HP:0002027 Abdominal pain 
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 HP:0002043 Esophageal stricture 
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 HP:0002091 Restrictive lung disease 
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 HP:0002094 Dyspnea 
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 HP:0002103 Abnormality of the pleura "An abnormality of the pleura, the thin, transparent membrane which covers the lungs and lines the inside of the chest walls." [HPO:curators]
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002239 Gastrointestinal hemorrhage 
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 HP:0002718 Recurrent bacterial infections 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003781 Excessive salivation 
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 HP:0003829 Incomplete penetrance 
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 HP:0004313 Reduced immunoglobulin levels 
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 HP:0006554 Acute hepatic failure "Hepatic failure refers to the inability of the liver to perform its normal synthetic and metabolic functions, which can result in coagulopathy and alteration in the mental status of a previously healthy individual. Hepatic failure is defined as acute if there is onset of encephalopathy within 8 weeks of the onset of symptoms in a patient with a previously healthy liver." [HPO:curators]
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0010783 Erythema "Redness of the skin, caused by hyperemia of the capillaries in the lower layers of the skin." [HPO:probinson]
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 HP:0010976 Reduction in B cell number "An abnormal decrease from the normal count of `B cells` (CL:0000236)." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0012733 Macule "A flat, distinct, discolored area of skin less than 1 cm wide that does not involve any change in the thickness or texture of the skin." [HPO:probinson]
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 HP:0012735 Cough "A sudden, audible expulsion of air from the lungs through a partially closed glottis, preceded by inhalation." [HPO:probinson]
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 HP:0030016 Dyspareunia "Recurrent or persistent genital pain associated with sexual intercourse." []
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 HP:0100518 Dysuria "Painful or difficult `urination` (GO:0060073)." [HPO:probinson]
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 HP:0100792 Acantolysis "The loss of intercellular connections, such as desmosomes, resulting in loss of cohesion between keratinocytes." [HPO:sdoelken]
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 HP:0100806 Sepsis 
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 HP:0200020 Corneal erosions "Erosions or Abbrasions of the cornea s outermost layer of epithelial cells." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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