ENSG00000198626


Homo sapiens

Features
Gene ID: ENSG00000198626
  
Biological name :RYR2
  
Synonyms : Q92736 / ryanodine receptor 2 / RYR2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q43
Gene start: 237042205
Gene end: 237833988
  
Corresponding Affymetrix probe sets: 207557_s_at (Human Genome U133 Plus 2.0 Array)   214044_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000353174
Ensembl peptide - ENSP00000355533
NCBI entrez gene - 6262     See in Manteia.
OMIM - 180902
RefSeq - XM_017002028
RefSeq - NM_001035
RefSeq - XM_006711807
RefSeq - XM_006711808
RefSeq - XM_006711810
RefSeq - XM_006711802
RefSeq - XM_006711803
RefSeq - XM_006711804
RefSeq - XM_006711805
RefSeq - XM_006711806
RefSeq Peptide - NP_001026
swissprot - Q92736
swissprot - H7BY35
Ensembl - ENSG00000198626
  
Related genetic diseases (OMIM): 600996 - Arrhythmogenic right ventricular dysplasia 2, 600996
  604772 - Ventricular tachycardia, catecholaminergic polymorphic, 1, 604772
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RYR2ENSDARG00000098856Danio rerio
 RYR2ENSGALG00000010812Gallus gallus
 Ryr2ENSMUSG00000021313Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RYR3 / Q15413 / ryanodine receptor 3ENSG0000019883868
RYR1 / P21817 / ryanodine receptor 1ENSG0000019621866
ITPR1 / Q14643 / inositol 1,4,5-trisphosphate receptor type 1ENSG0000015099513
ITPR3 / Q14573 / inositol 1,4,5-trisphosphate receptor type 3ENSG0000009643313
ITPR2 / Q14571 / inositol 1,4,5-trisphosphate receptor type 2ENSG0000012310413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000699  RIH domain
 IPR001870  B30.2/SPRY domain
 IPR002048  EF-hand domain
 IPR003032  Ryanodine receptor Ryr
 IPR003877  SPRY domain
 IPR005821  Ion transport domain
 IPR009460  Ryanodine Receptor TM 4-6
 IPR011989  Armadillo-like helical
 IPR011992  EF-hand domain pair
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013333  Ryanodine receptor
 IPR013662  RyR/IP3R Homology associated domain
 IPR014821  Inositol 1,4,5-trisphosphate/ryanodine receptor
 IPR015925  Ryanodine receptor-related
 IPR016093  MIR motif
 IPR035761  Ryanodine receptor, SPRY domain 1
 IPR035762  Ryanodine receptor, SPRY domain 3
 IPR035764  Ryanodine receptor, SPRY domain 2
 IPR035910  RyR/IP3 receptor binding core, RIH domain superfamily
 IPR036300  Mir domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0002027 regulation of heart rate IEA
 biological_processGO:0003143 embryonic heart tube morphogenesis IEA
 biological_processGO:0003220 left ventricular cardiac muscle tissue morphogenesis IEA
 biological_processGO:0003300 cardiac muscle hypertrophy IEA
 biological_processGO:0005513 detection of calcium ion IDA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0010460 positive regulation of heart rate IEA
 biological_processGO:0010881 regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion IEA
 biological_processGO:0010882 regulation of cardiac muscle contraction by calcium ion signaling IMP
 biological_processGO:0014808 release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IEA
 biological_processGO:0014850 response to muscle activity IMP
 biological_processGO:0019722 calcium-mediated signaling IEA
 biological_processGO:0030509 BMP signaling pathway IEA
 biological_processGO:0031000 response to caffeine IEA
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0035584 calcium-mediated signaling using intracellular calcium source IDA
 biological_processGO:0035994 response to muscle stretch IMP
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IEA
 biological_processGO:0051284 positive regulation of sequestering of calcium ion IDA
 biological_processGO:0051480 regulation of cytosolic calcium ion concentration ISS
 biological_processGO:0051775 response to redox state IDA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0055117 regulation of cardiac muscle contraction IMP
 biological_processGO:0060048 cardiac muscle contraction IMP
 biological_processGO:0060070 canonical Wnt signaling pathway IEA
 biological_processGO:0060401 cytosolic calcium ion transport IEA
 biological_processGO:0060402 calcium ion transport into cytosol IDA
 biological_processGO:0070296 sarcoplasmic reticulum calcium ion transport TAS
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0071313 cellular response to caffeine IEA
 biological_processGO:0071872 cellular response to epinephrine stimulus IEA
 biological_processGO:0072599 establishment of protein localization to endoplasmic reticulum IDA
 biological_processGO:0086005 ventricular cardiac muscle cell action potential IEA
 biological_processGO:0086029 Purkinje myocyte to ventricular cardiac muscle cell signaling IEA
 biological_processGO:0086064 cell communication by electrical coupling involved in cardiac conduction IC
 biological_processGO:0097050 type B pancreatic cell apoptotic process IMP
 biological_processGO:0098735 positive regulation of the force of heart contraction IMP
 biological_processGO:0098904 regulation of AV node cell action potential IMP
 biological_processGO:0098907 regulation of SA node cell action potential IMP
 biological_processGO:0098910 regulation of atrial cardiac muscle cell action potential IMP
 biological_processGO:0098911 regulation of ventricular cardiac muscle cell action potential IMP
 biological_processGO:1901896 positive regulation of calcium-transporting ATPase activity IDA
 biological_processGO:1903779 regulation of cardiac conduction TAS
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0005790 smooth endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0014701 junctional sarcoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IDA
 cellular_componentGO:0030017 sarcomere IEA
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane ISS
 cellular_componentGO:0034704 calcium channel complex IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005219 ryanodine-sensitive calcium-release channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005516 calmodulin binding ISS
 molecular_functionGO:0015278 calcium-release channel activity IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0034236 protein kinase A catalytic subunit binding IDA
 molecular_functionGO:0034237 protein kinase A regulatory subunit binding IDA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0043621 protein self-association IEA
 molecular_functionGO:0043924 suramin binding IMP
 molecular_functionGO:0044325 ion channel binding ISS
 molecular_functionGO:0048763 calcium-induced calcium release activity IDA
 molecular_functionGO:0097159 organic cyclic compound binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001645 Sudden cardiac death 
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 HP:0001699 Sudden death 
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0004308 Ventricular arrhythmia 
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 HP:0004756 Ventricular tachycardia 
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 HP:0004758 Effort-induced polymorphic ventricular tachycardias 
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 HP:0005110 Atrial fibrillation 
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 HP:0006698 Ventricular aneurysms 
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 HP:0011663 Arrhythmogenic right ventricular cardiomyopathy "Arrhythmogenic right ventricular cardiomyopathy (ARVC) is defined histologically by the presence of progressive replacement of right ventricular myocardium with adipose and fibrous tissue often confined to a triangle of dysplasia comprising the right ventricular inflow, outflow, and apex. While these pathologic abnormalities can result in functional and morphological right ventricular abnormalities, they also occur in the left ventricle, producing a DCM phenotype, or can be present in the absence of clinically detectable structural changes in either ventricle. For the purposes of this classification, ARVC is defined by the presence of right ventricular dysfunction (global or regional), with or without left ventricular disease, in the presence of histological evidence for the disease and/or electrocardiographic abnormalities in accordance with published criteria." [pmid:17916581]
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 HP:0025478 Atrial standstill "Atrial standstill or silent atrium is a rare condition presenting with the absence of electrical and mechanical activity in the atria. It presents with the absence of P waves, bradycardia, and wide QRS complex in the electrocardiogram." [PMID:23074623]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000198626 RYR2 / Q92736 / ryanodine receptor 2  / complex






 

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