ENSGALG00000000806


Gallus gallus

Features
Gene ID: ENSGALG00000000806
  
Biological name :LINGO3
  
Synonyms : leucine rich repeat and Ig domain containing 3 / LINGO3
  
Possible biological names infered from orthology : Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 / P0C6S8 / Q6GQU6
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 1980344
Gene end: 1982161
  
Corresponding Affymetrix probe sets: Gga.1602.1.S1_at (Chicken Array)   GgaAffx.22179.1.A1_at (Chicken Array)   GgaAffx.22179.1.S1_at (Chicken Array)   GgaAffx.527.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000060966
NCBI entrez gene - 420075     See in Manteia.
RefSeq - XM_015299862
RefSeq - XM_015299863
RefSeq - XM_418194
swissprot - A0A1L1RQ93
Ensembl - ENSGALG00000000806
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01060891.1ENSDARG00000067815Danio rerio
 lingo3aENSDARG00000061970Danio rerio
 LINGO3ENSG00000220008Homo sapiens
 Lingo3ENSMUSG00000051067Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LINGO2 / leucine rich repeat and Ig domain containing 2 / Q3URE9* / Q7L985*ENSGALG0000000186961
LINGO1 / Q50L44 / Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 / Q9D1T0* / Q96FE5* / leucine rich repeat and Ig domain containing 1*ENSGALG0000000270858
LRRN1 / leucine rich repeat neuronal 1 / Q61809* / Q6UXK5* / Leucine-rich repeat neuronal protein 1 *ENSGALG0000003509929
LRRN3 / leucine rich repeat neuronal 3 / Q8CBC6* / Q9H3W5* / Leucine-rich repeat neuronal protein 3 *ENSGALG0000000948826
LRRN2 / leucine rich repeat neuronal 2 / O75325* / leucine rich repeat protein 2, neuronal*ENSGALG0000000063926
LRRC4C / leucine rich repeat containing 4C / Q8C031* / Q9HCJ2* / Leucine-rich repeat-containing protein 4C *ENSGALG0000000794825
LRFN5 / leucine rich repeat and fibronectin type III domain containing 5 / Q8BXA0* / Q96NI6* / Leucine-rich repeat and fibronectin type-III domain-containing protein 5 *ENSGALG0000001250523
LRFN2 / leucine rich repeat and fibronectin type III domain containing 2 / Q80TG9* / Q9ULH4* / Leucine-rich repeat and fibronectin type-III domain-containing protein 2 *ENSGALG0000001005020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR026906  Leucine rich repeat 5
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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