ENSG00000220008


Homo sapiens

Features
Gene ID: ENSG00000220008
  
Biological name :LINGO3
  
Synonyms : leucine rich repeat and Ig domain containing 3 / LINGO3 / P0C6S8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.3
Gene start: 2289784
Gene end: 2292024
  
Corresponding Affymetrix probe sets: 1560439_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467753
NCBI entrez gene - 645191     See in Manteia.
OMIM - 609792
RefSeq - NM_001101391
RefSeq Peptide - NP_001094861
swissprot - P0C6S8
Ensembl - ENSG00000220008
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01060891.1ENSDARG00000067815Danio rerio
 lingo3aENSDARG00000061970Danio rerio
 LINGO3ENSGALG00000000806Gallus gallus
 Lingo3ENSMUSG00000051067Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LINGO2 / Q7L985 / leucine rich repeat and Ig domain containing 2ENSG0000017448257
LINGO1 / Q96FE5 / leucine rich repeat and Ig domain containing 1ENSG0000016978355
LINGO4 / Q6UY18 / leucine rich repeat and Ig domain containing 4ENSG0000021317144
LRRC4B / Q9NT99 / leucine rich repeat containing 4BENSG0000013140928
LRRN2 / O75325 / leucine rich repeat neuronal 2ENSG0000017038228
LRRN1 / Q6UXK5 / leucine rich repeat neuronal 1ENSG0000017592827
LRFN3 / Q9BTN0 / leucine rich repeat and fibronectin type III domain containing 3ENSG0000012624327
LRRC4C / Q9HCJ2 / leucine rich repeat containing 4CENSG0000014894827
LRRN3 / Q9H3W5 / leucine rich repeat neuronal 3ENSG0000017311426
LRFN4 / Q6PJG9 / leucine rich repeat and fibronectin type III domain containing 4ENSG0000017362125
LRRC4 / Q9HBW1 / leucine rich repeat containing 4ENSG0000012859425
LRFN1 / Q9P244 / leucine rich repeat and fibronectin type III domain containing 1ENSG0000012801124
LRFN2 / Q9ULH4 / leucine rich repeat and fibronectin type III domain containing 2ENSG0000015656424
LRFN5 / Q96NI6 / leucine rich repeat and fibronectin type III domain containing 5ENSG0000016537924


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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