ENSG00000174482


Homo sapiens

Features
Gene ID: ENSG00000174482
  
Biological name :LINGO2
  
Synonyms : leucine rich repeat and Ig domain containing 2 / LINGO2 / Q7L985
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: p21.1
Gene start: 27948078
Gene end: 28670286
  
Corresponding Affymetrix probe sets: 232720_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000310126
Ensembl peptide - ENSP00000369328
Ensembl peptide - ENSP00000479634
NCBI entrez gene - 158038     See in Manteia.
OMIM - 609793
RefSeq - XM_017014307
RefSeq - NM_001258282
RefSeq - NM_152570
RefSeq - XM_011517728
RefSeq - XM_017014303
RefSeq - XM_017014304
RefSeq - XM_017014305
RefSeq - XM_017014306
RefSeq - XM_011517719
RefSeq - XM_011517724
RefSeq Peptide - NP_001341503
RefSeq Peptide - NP_001341504
RefSeq Peptide - NP_689783
RefSeq Peptide - NP_001245211
swissprot - Q7L985
Ensembl - ENSG00000174482
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lingo2aENSDARG00000074535Danio rerio
 lingo2bENSDARG00000069970Danio rerio
 LINGO2ENSGALG00000001869Gallus gallus
 Lingo2ENSMUSG00000045083Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LINGO1 / Q96FE5 / leucine rich repeat and Ig domain containing 1ENSG0000016978361
LINGO3 / P0C6S8 / leucine rich repeat and Ig domain containing 3ENSG0000022000856
LINGO4 / Q6UY18 / leucine rich repeat and Ig domain containing 4ENSG0000021317142
LRRN1 / Q6UXK5 / leucine rich repeat neuronal 1ENSG0000017592827
LRRN3 / Q9H3W5 / leucine rich repeat neuronal 3ENSG0000017311426
LRRC4B / Q9NT99 / leucine rich repeat containing 4BENSG0000013140926
LRRC4C / Q9HCJ2 / leucine rich repeat containing 4CENSG0000014894826
LRRC4 / Q9HBW1 / leucine rich repeat containing 4ENSG0000012859425
LRRN2 / O75325 / leucine rich repeat neuronal 2ENSG0000017038224
LRFN2 / Q9ULH4 / leucine rich repeat and fibronectin type III domain containing 2ENSG0000015656424
LRFN1 / Q9P244 / leucine rich repeat and fibronectin type III domain containing 1ENSG0000012801124
LRFN4 / Q6PJG9 / leucine rich repeat and fibronectin type III domain containing 4ENSG0000017362123
LRFN3 / Q9BTN0 / leucine rich repeat and fibronectin type III domain containing 3ENSG0000012624323
LRFN5 / Q96NI6 / leucine rich repeat and fibronectin type III domain containing 5ENSG0000016537923


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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