ENSG00000173114


Homo sapiens

Features
Gene ID: ENSG00000173114
  
Biological name :LRRN3
  
Synonyms : leucine rich repeat neuronal 3 / LRRN3 / Q9H3W5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q31.1
Gene start: 111091006
Gene end: 111125454
  
Corresponding Affymetrix probe sets: 209840_s_at (Human Genome U133 Plus 2.0 Array)   209841_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000407927
Ensembl peptide - ENSP00000412417
Ensembl peptide - ENSP00000312001
Ensembl peptide - ENSP00000397312
NCBI entrez gene - 54674     See in Manteia.
RefSeq - NM_001099658
RefSeq - NM_001099660
RefSeq - NM_018334
RefSeq Peptide - NP_060804
RefSeq Peptide - NP_001093128
RefSeq Peptide - NP_001093130
swissprot - Q9H3W5
swissprot - E7EW58
swissprot - A4D0T1
Ensembl - ENSG00000173114
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrn3aENSDARG00000077569Danio rerio
 lrrn3bENSDARG00000102702Danio rerio
 LRRN3ENSGALG00000009488Gallus gallus
 Lrrn3ENSMUSG00000036295Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRN1 / Q6UXK5 / leucine rich repeat neuronal 1ENSG0000017592854
LRRN2 / O75325 / leucine rich repeat neuronal 2ENSG0000017038246
LINGO2 / Q7L985 / leucine rich repeat and Ig domain containing 2ENSG0000017448222
LINGO1 / Q96FE5 / leucine rich repeat and Ig domain containing 1ENSG0000016978322
LINGO3 / P0C6S8 / leucine rich repeat and Ig domain containing 3ENSG0000022000822
LRRC4B / Q9NT99 / leucine rich repeat containing 4BENSG0000013140920
LRRC4 / Q9HBW1 / leucine rich repeat containing 4ENSG0000012859420
LRFN2 / Q9ULH4 / leucine rich repeat and fibronectin type III domain containing 2ENSG0000015656420
LRRC4C / Q9HCJ2 / leucine rich repeat containing 4CENSG0000014894820
LINGO4 / Q6UY18 / leucine rich repeat and Ig domain containing 4ENSG0000021317120
LRFN5 / Q96NI6 / leucine rich repeat and fibronectin type III domain containing 5ENSG0000016537919
LRFN1 / Q9P244 / leucine rich repeat and fibronectin type III domain containing 1ENSG0000012801118
LRFN4 / Q6PJG9 / leucine rich repeat and fibronectin type III domain containing 4ENSG0000017362118
LRFN3 / Q9BTN0 / leucine rich repeat and fibronectin type III domain containing 3ENSG0000012624318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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