ENSG00000175928


Homo sapiens

Features
Gene ID: ENSG00000175928
  
Biological name :LRRN1
  
Synonyms : leucine rich repeat neuronal 1 / LRRN1 / Q6UXK5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p26.2
Gene start: 3799437
Gene end: 3847703
  
Corresponding Affymetrix probe sets: 226884_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000314901
NCBI entrez gene - 57633     See in Manteia.
RefSeq - NM_001324189
RefSeq - NM_020873
RefSeq - NM_001324188
RefSeq Peptide - NP_001311117
RefSeq Peptide - NP_001311118
RefSeq Peptide - NP_065924
swissprot - Q6UXK5
Ensembl - ENSG00000175928
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrn1ENSDARG00000060115Danio rerio
 LRRN1ENSGALG00000035099Gallus gallus
 Lrrn1ENSMUSG00000034648Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRN3 / Q9H3W5 / leucine rich repeat neuronal 3ENSG0000017311454
LRRN2 / O75325 / leucine rich repeat neuronal 2ENSG0000017038247
LINGO2 / Q7L985 / leucine rich repeat and Ig domain containing 2ENSG0000017448223
LINGO3 / P0C6S8 / leucine rich repeat and Ig domain containing 3ENSG0000022000822
LINGO1 / Q96FE5 / leucine rich repeat and Ig domain containing 1ENSG0000016978322
LRRC4 / Q9HBW1 / leucine rich repeat containing 4ENSG0000012859420
LRRC4C / Q9HCJ2 / leucine rich repeat containing 4CENSG0000014894820
LINGO4 / Q6UY18 / leucine rich repeat and Ig domain containing 4ENSG0000021317120
LRFN4 / Q6PJG9 / leucine rich repeat and fibronectin type III domain containing 4ENSG0000017362119
LRRC4B / Q9NT99 / leucine rich repeat containing 4BENSG0000013140919
LRFN2 / Q9ULH4 / leucine rich repeat and fibronectin type III domain containing 2ENSG0000015656418
LRFN5 / Q96NI6 / leucine rich repeat and fibronectin type III domain containing 5ENSG0000016537918
LRFN3 / Q9BTN0 / leucine rich repeat and fibronectin type III domain containing 3ENSG0000012624317
LRFN1 / Q9P244 / leucine rich repeat and fibronectin type III domain containing 1ENSG0000012801117


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr