ENSGALG00000035099


Gallus gallus

Features
Gene ID: ENSGALG00000035099
  
Biological name :LRRN1
  
Synonyms : leucine rich repeat neuronal 1 / LRRN1
  
Possible biological names infered from orthology : Leucine-rich repeat neuronal protein 1 / Q61809 / Q6UXK5
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 18314289
Gene end: 18331017
  
Corresponding Affymetrix probe sets: GgaAffx.5229.1.A1_at (Chicken Array)   GgaAffx.5229.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055609
NCBI entrez gene - 771599     See in Manteia.
RefSeq - NM_001097539
RefSeq Peptide - NP_001091008
swissprot - A4ZZA2
Ensembl - ENSGALG00000035099
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrn1ENSDARG00000060115Danio rerio
 LRRN1ENSG00000175928Homo sapiens
 Lrrn1ENSMUSG00000034648Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRN3 / leucine rich repeat neuronal 3 / Q8CBC6* / Q9H3W5* / Leucine-rich repeat neuronal protein 3 *ENSGALG0000000948853
LRRN2 / leucine rich repeat neuronal 2 / O75325* / leucine rich repeat protein 2, neuronal*ENSGALG0000000063946
LINGO3 / leucine rich repeat and Ig domain containing 3 / P0C6S8* / Q6GQU6* / Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 *ENSGALG0000000080624
LINGO2 / leucine rich repeat and Ig domain containing 2 / Q3URE9* / Q7L985*ENSGALG0000000186922
LINGO1 / Q50L44 / Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 / Q9D1T0* / Q96FE5* / leucine rich repeat and Ig domain containing 1*ENSGALG0000000270821
LRRC4C / leucine rich repeat containing 4C / Q8C031* / Q9HCJ2* / Leucine-rich repeat-containing protein 4C *ENSGALG0000000794820
LRFN5 / leucine rich repeat and fibronectin type III domain containing 5 / Q8BXA0* / Q96NI6* / Leucine-rich repeat and fibronectin type-III domain-containing protein 5 *ENSGALG0000001250518
LRFN2 / leucine rich repeat and fibronectin type III domain containing 2 / Q80TG9* / Q9ULH4* / Leucine-rich repeat and fibronectin type-III domain-containing protein 2 *ENSGALG0000001005015


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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