ENSGALG00000012505


Gallus gallus

Features
Gene ID: ENSGALG00000012505
  
Biological name :LRFN5
  
Synonyms : leucine rich repeat and fibronectin type III domain containing 5 / LRFN5
  
Possible biological names infered from orthology : Leucine-rich repeat and fibronectin type-III domain-containing protein 5 / Q8BXA0 / Q96NI6
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 59626099
Gene end: 59629021
  
Corresponding Affymetrix probe sets: Gga.15055.1.S1_at (Chicken Array)   Gga.5316.1.S1_at (Chicken Array)   Gga.5316.2.S1_s_at (Chicken Array)   Gga.5316.3.S1_at (Chicken Array)   GgaAffx.21258.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020403
NCBI entrez gene - 423599     See in Manteia.
RefSeq - XM_421485
swissprot - E1C6Q3
Ensembl - ENSGALG00000012505
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrfn5aENSDARG00000071230Danio rerio
 lrfn5bENSDARG00000079396Danio rerio
 LRFN5ENSG00000165379Homo sapiens
 Lrfn5ENSMUSG00000035653Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRFN2 / leucine rich repeat and fibronectin type III domain containing 2 / Q80TG9* / Q9ULH4* / Leucine-rich repeat and fibronectin type-III domain-containing protein 2 *ENSGALG0000001005036
LINGO1 / Q50L44 / Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 / Q9D1T0* / Q96FE5* / leucine rich repeat and Ig domain containing 1*ENSGALG0000000270820
LINGO3 / leucine rich repeat and Ig domain containing 3 / P0C6S8* / Q6GQU6* / Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 *ENSGALG0000000080618
LINGO2 / leucine rich repeat and Ig domain containing 2 / Q3URE9* / Q7L985*ENSGALG0000000186918
LRRC4C / leucine rich repeat containing 4C / Q8C031* / Q9HCJ2* / Leucine-rich repeat-containing protein 4C *ENSGALG0000000794818
LRRN3 / leucine rich repeat neuronal 3 / Q8CBC6* / Q9H3W5* / Leucine-rich repeat neuronal protein 3 *ENSGALG0000000948817
LRRN2 / leucine rich repeat neuronal 2 / O75325* / leucine rich repeat protein 2, neuronal*ENSGALG0000000063916
LRRN1 / leucine rich repeat neuronal 1 / Q61809* / Q6UXK5* / Leucine-rich repeat neuronal protein 1 *ENSGALG0000003509916


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR026879  Leucine-rich repeat and fibronectin type-III domain-containing protein 5
 IPR026906  Leucine rich repeat 5
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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