ENSG00000213171


Homo sapiens

Features
Gene ID: ENSG00000213171
  
Biological name :LINGO4
  
Synonyms : leucine rich repeat and Ig domain containing 4 / LINGO4 / Q6UY18
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 151800264
Gene end: 151806154
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000357810
NCBI entrez gene - 339398     See in Manteia.
OMIM - 609794
RefSeq - NM_001004432
RefSeq Peptide - NP_001004432
swissprot - Q6UY18
Ensembl - ENSG00000213171
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lingo4aENSDARG00000094908Danio rerio
 lingo4bENSDARG00000078527Danio rerio
 Lingo4ENSMUSG00000044505Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LINGO3 / P0C6S8 / leucine rich repeat and Ig domain containing 3ENSG0000022000844
LINGO1 / Q96FE5 / leucine rich repeat and Ig domain containing 1ENSG0000016978344
LINGO2 / Q7L985 / leucine rich repeat and Ig domain containing 2ENSG0000017448243
LRRN2 / O75325 / leucine rich repeat neuronal 2ENSG0000017038227
LRRC4B / Q9NT99 / leucine rich repeat containing 4BENSG0000013140926
LRRC4 / Q9HBW1 / leucine rich repeat containing 4ENSG0000012859426
LRRC4C / Q9HCJ2 / leucine rich repeat containing 4CENSG0000014894825
LRRN3 / Q9H3W5 / leucine rich repeat neuronal 3ENSG0000017311424
LRRN1 / Q6UXK5 / leucine rich repeat neuronal 1ENSG0000017592824
LRFN3 / Q9BTN0 / leucine rich repeat and fibronectin type III domain containing 3ENSG0000012624322
LRFN4 / Q6PJG9 / leucine rich repeat and fibronectin type III domain containing 4ENSG0000017362122
LRFN5 / Q96NI6 / leucine rich repeat and fibronectin type III domain containing 5ENSG0000016537921
LRFN2 / Q9ULH4 / leucine rich repeat and fibronectin type III domain containing 2ENSG0000015656420
LRFN1 / Q9P244 / leucine rich repeat and fibronectin type III domain containing 1ENSG0000012801120


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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