ENSGALG00000001977


Gallus gallus

Features
Gene ID: ENSGALG00000001977
  
Biological name :LDB3
  
Synonyms : LDB3
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 2373203
Gene end: 2444042
  
Corresponding Affymetrix probe sets: Gga.4841.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049208
NCBI entrez gene - 423610     See in Manteia.
RefSeq - NM_001286261
RefSeq Peptide - NP_001273190
swissprot - A0A1D5P909
Ensembl - ENSGALG00000001977
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ldb3bENSDARG00000099974Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDLIM5 / PDZ and LIM domain protein 5 / Q8CI51* / Q96HC4* / PDZ and LIM domain 5*ENSGALG0000001221133
PDLIM7 / PDZ and LIM domain protein 7 / Q3TJD7* / Q9NR12* / PDZ and LIM domain 7*ENSGALG0000002615927
PXN / paxillin / P49023* / Q8VI36*ENSGALG000000072477
FHL1 / four and a half LIM domains 1 / Fhl4* / P97447* / Q13642* / Four and a half LIM domains protein 1 *ENSGALG000000061906
LIMS2* / Q7Z4I7* / Q91XD2* / LIM zinc finger domain containing 2* / LIM and senescent cell antigen-like-containing domain protein 2 *ENSGALG000000019955
LIMS1 / LIM and senescent cell antigen-like-containing domain protein 1 / AC013271.1* / AC112229.3* / Mus musculus LIM and senescent cell antigen-like domains 1 (Lims1), transcript variant 6, mRNA.*ENSGALG000000299704
FHL3 / four and a half LIM domains 3 / Q13643* / Q9R059* / Four and a half LIM domains protein 3 *ENSGALG000000351874
FHL2 / four and a half LIM domains 2 / O70433* / Q14192* / Four and a half LIM domains protein 2 *ENSGALG000000167974
FHL5 / four and a half LIM domains 5 / Q5TD97* / Q9WTX7* / Four and a half LIM domains protein 5 *ENSGALG000000155733
ENSGALG000000442580
LIMS2* / Q7Z4I7* / Q91XD2* / LIM zinc finger domain containing 2* / LIM and senescent cell antigen-like-containing domain protein 2 *ENSGALG000000439660
ENSGALG000000458150
LIMS2* / Q7Z4I7* / Q91XD2* / LIM zinc finger domain containing 2* / LIM and senescent cell antigen-like-containing domain protein 2 *ENSGALG000000450550


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR006643  Zasp-like motif
 IPR031847  Domain of unknown function DUF4749


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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