ENSDARG00000099974


Danio rerio

Features
Gene ID: ENSDARG00000099974
  
Biological name :ldb3b
  
Synonyms : ldb3b / LIM domain binding 3b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 26023948
Gene end: 26064562
  
Corresponding Affymetrix probe sets: Dr.11483.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000139876
Ensembl peptide - ENSDARP00000151564
Ensembl peptide - ENSDARP00000150427
Ensembl peptide - ENSDARP00000141592
Ensembl peptide - ENSDARP00000134964
Ensembl peptide - ENSDARP00000139848
NCBI entrez gene - 334100     See in Manteia.
swissprot - A0A0R4IWD0
swissprot - A0A0R4IT29
swissprot - A0A0J9YJJ2
swissprot - Q802V0
ZFIN ID - ZDB-GENE-030131-6032
Ensembl - ENSDARG00000099974
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LDB3ENSGALG00000001977Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ldb3a / LIM domain binding 3a / LDB3* / O75112* / Q9JKS4* / LIM domain binding 3* / LIM domain-binding protein 3 *ENSDARG0000005632239
pdlim5a / PDZ and LIM domain 5a / PDLIM5* / Q8CI51* / Q96HC4* / PDZ and LIM domain 5* / PDZ and LIM domain protein 5 *ENSDARG0000010177735
pdlim5b / PDZ and LIM domain 5b / PDLIM5* / Q96HC4* / PDZ and LIM domain 5*ENSDARG0000002760034
CABZ01078593.1 / Q3TJD7* / PDLIM7* / Q9NR12* / PDZ and LIM domain 7* / PDZ and LIM domain protein 7 *ENSDARG0000010385423
fhl1a / four and a half LIM domains 1a / FHL1* / Fhl4* / Q13642* / P97447* / four and a half LIM domains 1* / Four and a half LIM domains protein 1 *ENSDARG000000714987
pxnb / paxillin b / PXN* / P49023* / paxillin*ENSDARG000000607667
pxna / paxillin a / PXN* / P49023* / Q8VI36* / paxillin*ENSDARG000000885907
fhl1b / four and a half LIM domains 1b / FHL1* / Fhl4* / Q13642* / P97447* / four and a half LIM domains 1* / Four and a half LIM domains protein 1 *ENSDARG000000566535
fhl3b / four and a half LIM domains 3b / FHL3* / Q13643* / Q9R059* / four and a half LIM domains 3* / Four and a half LIM domains protein 3 *ENSDARG000001043155
fhl2a / four and a half LIM domains 2a / FHL2* / O70433* / Q14192* / four and a half LIM domains 2* / Four and a half LIM domains protein 2 *ENSDARG000000420185
fhl5 / four and a half LIM domains 5 / Q5TD97* / Q9WTX7* / Four and a half LIM domains protein 5 *ENSDARG000000148055
fhl2b / four and a half LIM domains 2b / FHL2* / O70433* / Q14192* / four and a half LIM domains 2* / Four and a half LIM domains protein 2 *ENSDARG000000039915
fhl3a / four and a half LIM domains 3a / FHL3* / Q13643* / Q9R059* / four and a half LIM domains 3* / Four and a half LIM domains protein 3 *ENSDARG000000346435
lims2 / LIM and senescent cell antigen-like domains 2 / LIMS3* / LIMS4* / LIMS1* / P48059* / P0CW19* / P0CW20* / AC013271.1* / AC112229.3* / LIM zinc finger domain containing 3* / LIM zinc ...ENSDARG000000149764
lims1 / LIM and senescent cell antigen-like domains 1 / LIMS3* / LIMS4* / P48059* / P0CW19* / P0CW20* / AC013271.1* / AC112229.3* / LIM zinc finger domain containing 4* / LIM zinc finger do...ENSDARG000000269853
lpxn / leupaxin / O60711* / Q99N69*ENSDARG000000793152


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR006643  Zasp-like motif
 IPR031847  Domain of unknown function DUF4749


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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