ENSDARG00000079315


Danio rerio

Features
Gene ID: ENSDARG00000079315
  
Biological name :lpxn
  
Synonyms : leupaxin / lpxn
  
Possible biological names infered from orthology : O60711 / Q99N69
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 19948606
Gene end: 19977088
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114803
Ensembl peptide - ENSDARP00000156659
swissprot - F1QK19
ZFIN ID - ZDB-GENE-081105-159
Ensembl - ENSDARG00000079315
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LPXNENSG00000110031Homo sapiens
 LpxnENSMUSG00000024696Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pxna / paxillin a / PXN* / P49023* / Q8VI36* / paxillin*ENSDARG0000008859044
pxnb / paxillin b / PXN* / P49023* / paxillin*ENSDARG0000006076643
pdlim5a / PDZ and LIM domain 5a / PDLIM5* / Q8CI51* / Q96HC4* / PDZ and LIM domain 5* / PDZ and LIM domain protein 5 *ENSDARG0000010177719
CABZ01078593.1 / Q3TJD7* / PDLIM7* / Q9NR12* / PDZ and LIM domain 7* / PDZ and LIM domain protein 7 *ENSDARG0000010385419
ldb3a / LIM domain binding 3a / LDB3* / O75112* / Q9JKS4* / LIM domain binding 3* / LIM domain-binding protein 3 *ENSDARG0000005632219
pdlim5b / PDZ and LIM domain 5b / PDLIM5* / Q96HC4* / PDZ and LIM domain 5*ENSDARG0000002760019
fhl2b / four and a half LIM domains 2b / FHL2* / O70433* / Q14192* / four and a half LIM domains 2* / Four and a half LIM domains protein 2 *ENSDARG0000000399115
lims2 / LIM and senescent cell antigen-like domains 2 / LIMS3* / LIMS4* / LIMS1* / P48059* / P0CW19* / P0CW20* / AC013271.1* / AC112229.3* / LIM zinc finger domain containing 3* / LIM zinc ...ENSDARG0000001497615
fhl3b / four and a half LIM domains 3b / FHL3* / Q13643* / Q9R059* / four and a half LIM domains 3* / Four and a half LIM domains protein 3 *ENSDARG0000010431515
fhl2a / four and a half LIM domains 2a / FHL2* / O70433* / Q14192* / four and a half LIM domains 2* / Four and a half LIM domains protein 2 *ENSDARG0000004201815
fhl3a / four and a half LIM domains 3a / FHL3* / Q13643* / Q9R059* / four and a half LIM domains 3* / Four and a half LIM domains protein 3 *ENSDARG0000003464314
fhl5 / four and a half LIM domains 5 / Q5TD97* / Q9WTX7* / Four and a half LIM domains protein 5 *ENSDARG0000001480514
lims1 / LIM and senescent cell antigen-like domains 1 / LIMS3* / LIMS4* / P48059* / P0CW19* / P0CW20* / AC013271.1* / AC112229.3* / LIM zinc finger domain containing 4* / LIM zinc finger do...ENSDARG0000002698514
fhl1a / four and a half LIM domains 1a / FHL1* / Fhl4* / Q13642* / P97447* / four and a half LIM domains 1* / Four and a half LIM domains protein 1 *ENSDARG0000007149814
fhl1b / four and a half LIM domains 1b / FHL1* / Fhl4* / Q13642* / P97447* / four and a half LIM domains 1* / Four and a half LIM domains protein 1 *ENSDARG0000005665313
ldb3b / LIM domain binding 3bENSDARG000000999742


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR034961  Leupaxin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0002102 podosome IEA
 cellular_componentGO:0005925 focal adhesion IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr