Manteia

ENSDARG00000071498

Danio rerio

Features

Gene ID:	ENSDARG00000071498

Biological name :	fhl1a

Synonyms :	fhl1a / four and a half LIM domains 1a

Possible biological names infered from orthology :	FHL1 / Fhl4 / four and a half LIM domains 1 / Four and a half LIM domains protein 1 / P97447 / Q13642

Species:	Danio rerio

Chr. number:	14
Strand:	1
Band:
Gene start:	31651533
Gene end:	31668498

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000142083 Ensembl peptide - ENSDARP00000096545 NCBI entrez gene - 399646 See in Manteia. RefSeq - NM_001007287 RefSeq Peptide - NP_001007288 swissprot - A0A140LFQ9 swissprot - Q6GQL7 ZFIN ID - ZDB-GENE-040206-1 Ensembl - ENSDARG00000071498

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
FHL1	ENSGALG00000006190	Gallus gallus
FHL1	ENSG00000022267	Homo sapiens
Fhl1	ENSMUSG00000023092	Mus musculus
Fhl4	ENSMUSG00000050035	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
fhl1b / four and a half LIM domains 1b / FHL1* / Fhl4* / Q13642* / P97447* / four and a half LIM domains 1* / Four and a half LIM domains protein 1 *	ENSDARG00000056653	63
fhl2b / four and a half LIM domains 2b / FHL2* / O70433* / Q14192* / four and a half LIM domains 2* / Four and a half LIM domains protein 2 *	ENSDARG00000003991	45
fhl2a / four and a half LIM domains 2a / FHL2* / O70433* / Q14192* / four and a half LIM domains 2* / Four and a half LIM domains protein 2 *	ENSDARG00000042018	45
fhl5 / four and a half LIM domains 5 / Q5TD97* / Q9WTX7* / Four and a half LIM domains protein 5 *	ENSDARG00000014805	44
fhl3a / four and a half LIM domains 3a / FHL3* / Q13643* / Q9R059* / four and a half LIM domains 3* / Four and a half LIM domains protein 3 *	ENSDARG00000034643	43
fhl3b / four and a half LIM domains 3b / FHL3* / Q13643* / Q9R059* / four and a half LIM domains 3* / Four and a half LIM domains protein 3 *	ENSDARG00000104315	43
lims1 / LIM and senescent cell antigen-like domains 1 / LIMS3* / LIMS4* / P48059* / P0CW19* / P0CW20* / AC013271.1* / AC112229.3* / LIM zinc finger domain containing 4* / LIM zinc finger do...	ENSDARG00000026985	25
pdlim5b / PDZ and LIM domain 5b / PDLIM5* / Q96HC4* / PDZ and LIM domain 5*	ENSDARG00000027600	24
lims2 / LIM and senescent cell antigen-like domains 2 / LIMS3* / LIMS4* / LIMS1* / P48059* / P0CW19* / P0CW20* / AC013271.1* / AC112229.3* / LIM zinc finger domain containing 3* / LIM zinc ...	ENSDARG00000014976	24
pdlim5a / PDZ and LIM domain 5a / PDLIM5* / Q8CI51* / Q96HC4* / PDZ and LIM domain 5* / PDZ and LIM domain protein 5 *	ENSDARG00000101777	24
ldb3a / LIM domain binding 3a / LDB3* / O75112* / Q9JKS4* / LIM domain binding 3* / LIM domain-binding protein 3 *	ENSDARG00000056322	22
lpxn / leupaxin / O60711* / Q99N69*	ENSDARG00000079315	20
pxna / paxillin a / PXN* / P49023* / Q8VI36* / paxillin*	ENSDARG00000088590	19
pxnb / paxillin b / PXN* / P49023* / paxillin*	ENSDARG00000060766	19
CABZ01078593.1 / Q3TJD7* / PDLIM7* / Q9NR12* / PDZ and LIM domain 7* / PDZ and LIM domain protein 7 *	ENSDARG00000103854	19
ldb3b / LIM domain binding 3b	ENSDARG00000099974	7

Protein motifs (from Interpro)

Interpro ID	Name
IPR001781	Zinc finger, LIM-type

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0003206	cardiac chamber morphogenesis	IMP
biological_process	GO:0003208	cardiac ventricle morphogenesis	IMP
biological_process	GO:0003209	cardiac atrium morphogenesis	IMP
biological_process	GO:0007626	locomotory behavior	IMP
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000009	cardiac ventricle	cardiac ventricle increased size , abnormal cardiac ventricle has extra parts of type cell , abnormal	Show
ZFA:0000471	atrium	atrium increased size , abnormal atrium has extra parts of type cell , abnormal	Show
ZFA:0001094	whole organism	whole organism curved , abnormal whole organism decreased mobility , abnormal	Show
ZFA:0001115	trunk	trunk decreased length , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr