ENSGALG00000002125


Gallus gallus

Features
Gene ID: ENSGALG00000002125
  
Biological name :TMOD1
  
Synonyms : TMOD1 / tropomodulin-1
  
Possible biological names infered from orthology : P28289 / P49813
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 70791617
Gene end: 70807645
  
Corresponding Affymetrix probe sets: Gga.2614.1.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003317
NCBI entrez gene - 395883     See in Manteia.
RefSeq - NM_205027
RefSeq - XM_015280589
RefSeq - XM_015280591
RefSeq Peptide - NP_990358
swissprot - F1NY71
Ensembl - ENSGALG00000002125
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmod1ENSDARG00000078318Danio rerio
 TMOD1ENSG00000136842Homo sapiens
 Tmod1ENSMUSG00000028328Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMOD4 / tropomodulin-4 / Q9JLH8* / Q9NZQ9*ENSGALG0000003024762
TMOD3 / tropomodulin 3 / Q9JHJ0* / Q9NYL9*ENSGALG0000000471060
TMOD2 / tropomodulin 2 / Q9JKK7* / Q9NZR1*ENSGALG0000000474051
LMOD2 / E1BTG2 / Leiomodin-2 / Q3UHZ5* / Q6P5Q4*ENSGALG0000000880539
LMOD3 / leiomodin 3 / E9QA62* / Q0VAK6*ENSGALG0000001894635
LMOD1 / leiomodin 1 / P29536*ENSGALG0000002872133


Protein motifs (from Interpro)
Interpro ID Name
 IPR004934  Tropomodulin
 IPR030135  Tropomodulin-1
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IEA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0008344 adult locomotory behavior IEA
 biological_processGO:0030239 myofibril assembly IEA
 biological_processGO:0051694 pointed-end actin filament capping IEA
 biological_processGO:0070307 lens fiber cell development IEA
 cellular_componentGO:0005865 striated muscle thin filament IEA
 cellular_componentGO:0005884 actin filament IEA
 cellular_componentGO:0008180 COP9 signalosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030016 myofibril IEA
 cellular_componentGO:0030017 sarcomere IDA
 cellular_componentGO:0030863 cortical cytoskeleton IEA
 cellular_componentGO:0042383 sarcolemma IDA
 cellular_componentGO:0043034 costamere IDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005523 tropomyosin binding IBA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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