ENSGALG00000030247


Gallus gallus

Features
Gene ID: ENSGALG00000030247
  
Biological name :TMOD4
  
Synonyms : TMOD4 / tropomodulin-4
  
Possible biological names infered from orthology : Q9JLH8 / Q9NZQ9
  
Species: Gallus gallus
  
Chr. number: 25
Strand: -1
Band:
Gene start: 2669483
Gene end: 2672989
  
Corresponding Affymetrix probe sets: Gga.204.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052470
Ensembl peptide - ENSGALP00000047692
NCBI entrez gene - 395547     See in Manteia.
RefSeq - XM_015280001
RefSeq - NM_204774
RefSeq Peptide - NP_990105
swissprot - A0A1D5PI38
swissprot - H9KZU7
Ensembl - ENSGALG00000030247
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmod4ENSDARG00000020890Danio rerio
 TMOD4ENSG00000163157Homo sapiens
 Tmod4ENSMUSG00000005628Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMOD1 / tropomodulin-1 / P28289* / P49813*ENSGALG0000000212564
TMOD3 / tropomodulin 3 / Q9JHJ0* / Q9NYL9*ENSGALG0000000471059
TMOD2 / tropomodulin 2 / Q9JKK7* / Q9NZR1*ENSGALG0000000474049
LMOD2 / E1BTG2 / Leiomodin-2 / Q3UHZ5* / Q6P5Q4*ENSGALG0000000880533
LMOD1 / leiomodin 1 / P29536*ENSGALG0000002872131
LMOD3 / leiomodin 3 / E9QA62* / Q0VAK6*ENSGALG0000001894630


Protein motifs (from Interpro)
Interpro ID Name
 IPR004934  Tropomodulin
 IPR030129  Tropomodulin-4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051694 pointed-end actin filament capping IEA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0005865 striated muscle thin filament IDA
 cellular_componentGO:0016020 membrane IDA
 molecular_functionGO:0005523 tropomyosin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr