ENSMUSG00000005628


Mus musculus

Features
Gene ID: ENSMUSG00000005628
  
Biological name :Tmod4
  
Synonyms : Q9JLH8 / Tmod4 / tropomodulin 4
  
Possible biological names infered from orthology : Q9NZQ9
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F2.1
Gene start: 95124476
Gene end: 95129209
  
Corresponding Affymetrix probe sets: 10494160 (MoGene1.0st)   1449969_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000005769
Ensembl peptide - ENSMUSP00000102846
Ensembl peptide - ENSMUSP00000116341
NCBI entrez gene - 50874     See in Manteia.
MGI - MGI:1355285
RefSeq - XM_017319637
RefSeq - NM_016712
RefSeq - XM_017319636
RefSeq Peptide - NP_057921
swissprot - Q3UN19
swissprot - Q9JLH8
swissprot - D3Z5Q9
Ensembl - ENSMUSG00000005628
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmod4ENSDARG00000020890Danio rerio
 TMOD4ENSGALG00000030247Gallus gallus
 TMOD4ENSG00000163157Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tmod1 / P49813 / Tropomodulin-1 / P28289*ENSMUSG0000002832857
Tmod3 / Q9JHJ0 / tropomodulin 3 / Q9NYL9*ENSMUSG0000005858756
Tmod2 / Q9JKK7 / tropomodulin 2 / Q9NZR1*ENSMUSG0000003218653
Lmod2 / Q3UHZ5 / Leiomodin-2 / Q6P5Q4*ENSMUSG0000002968336
Lmod3 / E9QA62 / Leiomodin-3 / Q0VAK6*ENSMUSG0000004408634
Lmod1 / leiomodin 1 / P29536*ENSMUSG0000004809633


Protein motifs (from Interpro)
Interpro ID Name
 IPR004934  Tropomodulin
 IPR030129  Tropomodulin-4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0030239 myofibril assembly IBA
 biological_processGO:0051694 pointed-end actin filament capping IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005865 striated muscle thin filament IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005523 tropomyosin binding IDA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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