ENSGALG00000028721


Gallus gallus

Features
Gene ID: ENSGALG00000028721
  
Biological name :LMOD1
  
Synonyms : leiomodin 1 / LMOD1
  
Possible biological names infered from orthology : P29536
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 1113766
Gene end: 1123749
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000041357
NCBI entrez gene - 771476     See in Manteia.
RefSeq - XM_004934868
swissprot - R4GH27
Ensembl - ENSGALG00000028721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lmod1aENSDARG00000056111Danio rerio
 lmod1bENSDARG00000077261Danio rerio
 LMOD1ENSG00000163431Homo sapiens
 Lmod1ENSMUSG00000048096Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LMOD2 / E1BTG2 / Leiomodin-2 / Q3UHZ5* / Q6P5Q4*ENSGALG0000000880536
LMOD3 / leiomodin 3 / E9QA62* / Q0VAK6*ENSGALG0000001894631
TMOD1 / tropomodulin-1 / P28289* / P49813*ENSGALG0000000212523
TMOD3 / tropomodulin 3 / Q9JHJ0* / Q9NYL9*ENSGALG0000000471021
TMOD4 / tropomodulin-4 / Q9JLH8* / Q9NZQ9*ENSGALG0000003024720
TMOD2 / tropomodulin 2 / Q9JKK7* / Q9NZR1*ENSGALG0000000474019


Protein motifs (from Interpro)
Interpro ID Name
 IPR003124  WH2 domain
 IPR004934  Tropomodulin
 IPR030136  Leiomodin-1
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0030239 myofibril assembly IBA
 biological_processGO:0030838 positive regulation of actin filament polymerization IEA
 biological_processGO:0045010 actin nucleation IEA
 biological_processGO:0051694 pointed-end actin filament capping IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005865 striated muscle thin filament IBA
 cellular_componentGO:0030016 myofibril IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005523 tropomyosin binding IBA


Pathways (from Reactome)
Pathway description
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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