ENSGALG00000002189


Gallus gallus

Features
Gene ID: ENSGALG00000002189
  
Biological name :SNX1
  
Synonyms : SNX1 / sorting nexin 1
  
Possible biological names infered from orthology : Q13596
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 1235256
Gene end: 1247373
  
Corresponding Affymetrix probe sets: Gga.4642.1.S1_at (Chicken Array)   GgaAffx.25424.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000034083
Ensembl peptide - ENSGALP00000064583
NCBI entrez gene - 427480     See in Manteia.
RefSeq - XM_425052
swissprot - A0A1L1S0C5
swissprot - F1NW87
Ensembl - ENSGALG00000002189
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx1aENSDARG00000071031Danio rerio
 SNX1ENSG00000028528Homo sapiens
 Snx1ENSMUSG00000032382Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX2 / sorting nexin-2 / O60749* / Q9CWK8*ENSGALG0000000533758
SNX5 / sorting nexin-5 / Q9D8U8* / Q9Y5X3*ENSGALG0000000869118
SNX6 / sorting nexin 6 / Q6P8X1* / Q9UNH7* / Sorting nexin-6 Sorting nexin-6, N-terminally processed*ENSGALG0000001002517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR005329  Sorting nexin, N-terminal
 IPR015404  Sorting nexin Vps5-like, C-terminal
 IPR027267  AH/BAR domain superfamily
 IPR028660  Sorting nexin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0016050 vesicle organization IBA
 biological_processGO:0031623 receptor internalization IEA
 biological_processGO:0034498 early endosome to Golgi transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 biological_processGO:0072673 lamellipodium morphogenesis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0030904 retromer complex IEA
 cellular_componentGO:0030905 retromer, tubulation complex IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005154 epidermal growth factor receptor binding IEA
 molecular_functionGO:0005158 insulin receptor binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:1990459 transferrin receptor binding IEA
 molecular_functionGO:1990460 leptin receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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