ENSGALG00000008691


Gallus gallus

Features
Gene ID: ENSGALG00000008691
  
Biological name :SNX5
  
Synonyms : SNX5 / sorting nexin-5
  
Possible biological names infered from orthology : Q9D8U8 / Q9Y5X3
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 15476487
Gene end: 15493476
  
Corresponding Affymetrix probe sets: GgaAffx.13155.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000032624
NCBI entrez gene - 416718     See in Manteia.
RefSeq - NM_001006178
RefSeq - XM_015283465
RefSeq Peptide - NP_001006178
swissprot - F1P337
Ensembl - ENSGALG00000008691
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx5ENSDARG00000020442Danio rerio
 SNX5ENSG00000089006Homo sapiens
 Snx5ENSMUSG00000027423Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX6 / sorting nexin 6 / Q6P8X1* / Q9UNH7* / Sorting nexin-6 Sorting nexin-6, N-terminally processed*ENSGALG0000001002565
SNX1 / sorting nexin 1 / Q13596*ENSGALG0000000218924
SNX2 / sorting nexin-2 / O60749* / Q9CWK8*ENSGALG0000000533723


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR014637  Sorting nexin-5/6/32
 IPR015404  Sorting nexin Vps5-like, C-terminal
 IPR028654  Sorting nexin-5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0006907 pinocytosis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016050 vesicle organization IBA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0030904 retromer complex IEA
 cellular_componentGO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEA
 cellular_componentGO:0031313 extrinsic component of endosome membrane IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0070685 macropinocytic cup IEA
 cellular_componentGO:0097422 tubular endosome IEA
 molecular_functionGO:0034452 dynactin binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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