ENSGALG00000010025


Gallus gallus

Features
Gene ID: ENSGALG00000010025
  
Biological name :SNX6
  
Synonyms : SNX6 / sorting nexin 6
  
Possible biological names infered from orthology : Q6P8X1 / Q9UNH7 / Sorting nexin-6 Sorting nexin-6, N-terminally processed
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 35952635
Gene end: 35975560
  
Corresponding Affymetrix probe sets: Gga.13537.1.S1_s_at (Chicken Array)   GgaAffx.12365.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052630
Ensembl peptide - ENSGALP00000016263
NCBI entrez gene - 771038     See in Manteia.
RefSeq - XM_015287566
RefSeq - NM_001079757
RefSeq Peptide - NP_001073225
swissprot - Q5ZK22
swissprot - A0A1D5PIJ7
Ensembl - ENSGALG00000010025
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx6ENSDARG00000058444Danio rerio
 SNX6ENSG00000129515Homo sapiens
 Snx6ENSMUSG00000005656Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX5 / sorting nexin-5 / Q9D8U8* / Q9Y5X3*ENSGALG0000000869164
SNX2 / sorting nexin-2 / O60749* / Q9CWK8*ENSGALG0000000533723
SNX1 / sorting nexin 1 / Q13596*ENSGALG0000000218922


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR014637  Sorting nexin-5/6/32
 IPR015404  Sorting nexin Vps5-like, C-terminal
 IPR027267  AH/BAR domain superfamily
 IPR028657  Sorting nexin-6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 molecular_functionGO:0034713 type I transforming growth factor beta receptor binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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