ENSGALG00000002294


Gallus gallus

Features
Gene ID: ENSGALG00000002294
  
Biological name :SEMA6A
  
Synonyms : SEMA6A / semaphorin 6A
  
Possible biological names infered from orthology : O35464 / Q9H2E6
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 72560783
Gene end: 72672912
  
Corresponding Affymetrix probe sets: Gga.17547.1.S1_s_at (Chicken Array)   GgaAffx.25442.1.S1_s_at (Chicken Array)   GgaAffx.25442.4.S1_at (Chicken Array)   GgaAffx.25442.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003601
Ensembl peptide - ENSGALP00000051632
Ensembl peptide - ENSGALP00000050962
Ensembl peptide - ENSGALP00000049469
Ensembl peptide - ENSGALP00000046428
NCBI entrez gene - 427387     See in Manteia.
RefSeq - XM_424960
RefSeq - XM_004949625
RefSeq - XM_004949626
RefSeq - XM_015280674
RefSeq - XM_015280675
RefSeq - XM_015280677
RefSeq - XM_003643072
swissprot - A0A1D5P9R3
swissprot - A0A090AVG4
swissprot - A0A090ATY8
swissprot - A0A090AQR1
swissprot - E1C1C2
Ensembl - ENSGALG00000002294
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9H2E6ENSG00000092421Homo sapiens
 O35464ENSMUSG00000019647Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA6D / semaphorin 6D / Q76KF0* / Q8NFY4*ENSGALG0000003054246
SEMA6B / Gallus gallus semaphorin 6B (SEMA6B), mRNA. / Q9H3T3* / O54951* / semaphorin 6B* / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B*ENSGALG0000000117141
SEMA6C / semaphorin 6C / Q9H3T2* / Q9WTM3* / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C*ENSGALG0000004531230
SEMA5A / semaphorin 5A / Q13591* / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A*ENSGALG0000002868524
SEMA5B / semaphorin 5B / Q60519* / Q9P283*ENSGALG0000001168623
SEMA7A / semaphorin 7A (John Milton Hagen blood group) / O75326* / Q9QUR8* / Semaphorin-7A *ENSGALG0000000141213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0007166 cell surface receptor signaling pathway IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0051642 centrosome localization IEA
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 biological_processGO:2001224 positive regulation of neuron migration IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0030215 semaphorin receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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