ENSGALG00000028685


Gallus gallus

Features
Gene ID: ENSGALG00000028685
  
Biological name :SEMA5A
  
Synonyms : SEMA5A / semaphorin 5A
  
Possible biological names infered from orthology : Q13591 / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 78926050
Gene end: 79169210
  
Corresponding Affymetrix probe sets: Gga.7894.1.S1_at (Chicken Array)   GgaAffx.24100.1.S1_s_at (Chicken Array)   GgaAffx.8277.1.S1_at (Chicken Array)   GgaAffx.8277.2.S1_at (Chicken Array)   GgaAffx.8277.2.S1_s_at (Chicken Array)   GgaAffx.8278.1.S1_at (Chicken Array)   GgaAffx.8279.1.S1_at (Chicken Array)   GgaAffx.8279.1.S1_s_at (Chicken Array)   GgaAffx.8279.1.S1_x_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051630
Ensembl peptide - ENSGALP00000040898
NCBI entrez gene - 420931     See in Manteia.
RefSeq - XM_419016
RefSeq - XM_015282268
RefSeq - XM_015282269
RefSeq - XM_015282264
RefSeq - XM_015282265
RefSeq - XM_015282266
RefSeq - XM_015282267
swissprot - R4GFU3
swissprot - A0A1D5PFR3
Ensembl - ENSGALG00000028685
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema5aENSDARG00000058821Danio rerio
 Q13591ENSG00000112902Homo sapiens
 Sema5aENSMUSG00000022231Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA5B / semaphorin 5B / Q60519* / Q9P283*ENSGALG0000001168660
SEMA6A / semaphorin 6A / O35464* / Q9H2E6*ENSGALG0000000229423
SEMA6D / semaphorin 6D / Q76KF0* / Q8NFY4*ENSGALG0000003054222
SEMA6B / Gallus gallus semaphorin 6B (SEMA6B), mRNA. / Q9H3T3* / O54951* / semaphorin 6B* / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B*ENSGALG0000000117121
SEMA6C / semaphorin 6C / Q9H3T2* / Q9WTM3* / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C*ENSGALG0000004531216
SEMA7A / semaphorin 7A (John Milton Hagen blood group) / O75326* / Q9QUR8* / Semaphorin-7A *ENSGALG0000000141212


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001627  Sema domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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