ENSGALG00000030542


Gallus gallus

Features
Gene ID: ENSGALG00000030542
  
Biological name :SEMA6D
  
Synonyms : SEMA6D / semaphorin 6D
  
Possible biological names infered from orthology : Q76KF0 / Q8NFY4
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 9898756
Gene end: 9911145
  
Corresponding Affymetrix probe sets: Gga.12880.2.S1_s_at (Chicken Array)   Gga.18451.1.S1_at (Chicken Array)   GgaAffx.21262.1.S1_s_at (Chicken Array)   GgaAffx.3009.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054036
NCBI entrez gene - 415430     See in Manteia.
RefSeq - XM_015291937
RefSeq - XM_015291938
RefSeq - XM_015291939
RefSeq - XM_015291940
RefSeq - XM_015291941
RefSeq - XM_015291942
RefSeq - XM_015291943
RefSeq - XM_015291944
RefSeq - XM_015291945
RefSeq - XM_015291947
RefSeq - XM_015291948
RefSeq - XM_015291949
RefSeq - XM_015291950
RefSeq - XM_015291951
RefSeq - XM_001231858
swissprot - A0A1D5PMF8
Ensembl - ENSGALG00000030542
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema6dlENSDARG00000011533Danio rerio
 Q8NFY4ENSG00000137872Homo sapiens
 Q76KF0ENSMUSG00000027200Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA6A / semaphorin 6A / O35464* / Q9H2E6*ENSGALG0000000229445
SEMA6B / Gallus gallus semaphorin 6B (SEMA6B), mRNA. / Q9H3T3* / O54951* / semaphorin 6B* / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B*ENSGALG0000000117134
SEMA6C / semaphorin 6C / Q9H3T2* / Q9WTM3* / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C*ENSGALG0000004531232
SEMA5A / semaphorin 5A / Q13591* / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A*ENSGALG0000002868522
SEMA5B / semaphorin 5B / Q60519* / Q9P283*ENSGALG0000001168621
SEMA7A / semaphorin 7A (John Milton Hagen blood group) / O75326* / Q9QUR8* / Semaphorin-7A *ENSGALG0000000141212


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0014911 positive regulation of smooth muscle cell migration IEA
 biological_processGO:0014912 negative regulation of smooth muscle cell migration IEA
 biological_processGO:0021591 ventricular system development IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0030215 semaphorin receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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