ENSGALG00000045312


Gallus gallus

Features
Gene ID: ENSGALG00000045312
  
Biological name :SEMA6C
  
Synonyms : SEMA6C / semaphorin 6C
  
Possible biological names infered from orthology : Q9H3T2 / Q9WTM3 / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
  
Species: Gallus gallus
  
Chr. number: 25
Strand: -1
Band:
Gene start: 2658470
Gene end: 2664070
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000060561
NCBI entrez gene - 100859892     See in Manteia.
RefSeq - XM_015280041
RefSeq - XM_015280042
RefSeq - XM_015280043
swissprot - A0A1L1RP59
Ensembl - ENSGALG00000045312
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema6dENSDARG00000002748Danio rerio
 sema6eENSDARG00000000189Danio rerio
 Q9H3T2ENSG00000143434Homo sapiens
 Q9WTM3ENSMUSG00000038777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA6D / semaphorin 6D / Q76KF0* / Q8NFY4*ENSGALG0000003054243
SEMA6A / semaphorin 6A / O35464* / Q9H2E6*ENSGALG0000000229439
SEMA6B / Gallus gallus semaphorin 6B (SEMA6B), mRNA. / Q9H3T3* / O54951* / semaphorin 6B* / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B*ENSGALG0000000117135
SEMA5B / semaphorin 5B / Q60519* / Q9P283*ENSGALG0000001168623
SEMA5A / semaphorin 5A / Q13591* / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A*ENSGALG0000002868522
SEMA7A / semaphorin 7A (John Milton Hagen blood group) / O75326* / Q9QUR8* / Semaphorin-7A *ENSGALG0000000141214


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR015514  Semaphorin 6C
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr