ENSGALG00000002298


Gallus gallus

Features
Gene ID: ENSGALG00000002298
  
Biological name :COL8A2
  
Synonyms : COL8A2 / collagen type VIII alpha 2 chain
  
Possible biological names infered from orthology : Collagen alpha-2(VIII) chain / P25067 / P25318
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 4146476
Gene end: 4152419
  
Corresponding Affymetrix probe sets: GgaAffx.1539.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003607
NCBI entrez gene - 428221     See in Manteia.
RefSeq - XM_425780
swissprot - F1P194
Ensembl - ENSGALG00000002298
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col8a2ENSDARG00000060893Danio rerio
 COL8A2ENSG00000171812Homo sapiens
 Col8a2ENSMUSG00000056174Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL10A1 / collagen type X alpha 1 chain / Q03692* / Q05306* / Collagen alpha-1(X) chain *ENSGALG0000001496555
COL8A1 / collagen alpha-1(VIII) chain precursor / P27658* / Q00780* / collagen type VIII alpha 1 chain* / Collagen alpha-1(VIII) chain Vastatin*ENSGALG0000001525355
OTOL1 / otolin 1 / A6NHN0* / Q4ZJM7*ENSGALG0000002630522
B2RNN3* / P0C862* / Q4ZJN1* / C1QTNF9* / C1QTNF9B* / C1q and TNF related 9* / C1q and TNF related 9B* / Complement C1q and tumor necrosis factor-related protein 9 *ENSGALG0000001711720
C1QTNF2 / C1q and TNF related 2 / Q9BXJ5* / Q9D8U4* / Complement C1q tumor necrosis factor-related protein 2 *ENSGALG0000002723215
C1QTNF7 / C1q and TNF related 7 / Q8BVD7* / Q9BXJ2* / Complement C1q tumor necrosis factor-related protein 7 *ENSGALG0000001451514
ADIPOQ / adiponectin precursor / Q15848* / Q60994* / Adiponectin * / adiponectin, C1Q and collagen domain containing*ENSGALG0000000555413
C1QC / complement C1q C chain / P02747* / Q02105* / Complement C1q subcomponent subunit C *ENSGALG0000002966913
C1QB / complement C1q B chain / P02746* / P14106* / Complement C1q subcomponent subunit B *ENSGALG0000000477112
C1QTNF5 / C1q and TNF related 5 / Q8K479* / Q9BXJ0* / Complement C1q tumor necrosis factor-related protein 5 *ENSGALG0000000675811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048593 camera-type eye morphogenesis IEA
 biological_processGO:0050673 epithelial cell proliferation IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0031012 extracellular matrix IEA


Pathways (from Reactome)
Pathway description
Collagen degradation
Collagen biosynthesis and modifying enzymes
Assembly of collagen fibrils and other multimeric structures
Integrin cell surface interactions
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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