ENSGALG00000002394


Gallus gallus

Features
Gene ID: ENSGALG00000002394
  
Biological name :RGP1
  
Synonyms : RGP1 / RGP1 homolog, RAB6A GEF complex partner 1
  
Possible biological names infered from orthology : Q8BHT7 / Q92546 / RAB6A-GEF complex partner protein 2
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 9116332
Gene end: 9126132
  
Corresponding Affymetrix probe sets: GgaAffx.1592.1.S1_at (Chicken Array)   GgaAffx.1592.1.S1_s_at (Chicken Array)   GgaAffx.1592.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003760
Ensembl peptide - ENSGALP00000060150
Ensembl peptide - ENSGALP00000058346
NCBI entrez gene - 431658     See in Manteia.
RefSeq - NM_001031611
RefSeq - XM_015277354
RefSeq - XM_015277355
RefSeq Peptide - NP_001026782
swissprot - A0A1L1RMZ7
swissprot - A0A1D5PZD5
swissprot - F1NZ59
Ensembl - ENSGALG00000002394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rgp1ENSDARG00000006545Danio rerio
 RGP1ENSG00000107185Homo sapiens
 Rgp1ENSMUSG00000028468Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR014848  Reduced growth phenotype protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:1903363 negative regulation of cellular protein catabolic process IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0034066 RIC1-RGP1 guanyl-nucleotide exchange factor complex IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015036 RIC1 / RIC1 homolog, RAB6A GEF complex partner 1 / Q4ADV7* / Q69ZJ7* / RAB6A-GEF complex partner protein 1 *  / complex
 ENSGALG00000017320 RAB6A / Q1KME6 / Ras-related protein Rab-6A / RAB6D* / RAB6C* / Q9H0N0* / P35279* / P20340* / RAB6A, member RAS oncogene family* / RAB6D, member RAS oncogene family* / RAB6C, member RAS on...  / reaction / complex
 ENSGALG00000009790 RAB33B / Q5ZHV1 / Ras-related protein Rab-33B / Q9H082* / O35963* / RAB33B, member RAS oncogene family*  / reaction / complex






 

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