ENSGALG00000009790


Gallus gallus

Features
Gene ID: ENSGALG00000009790
  
Biological name :RAB33B
  
Synonyms : Q5ZHV1 / RAB33B / Ras-related protein Rab-33B
  
Possible biological names infered from orthology : O35963 / Q9H082 / RAB33B, member RAS oncogene family
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 29539318
Gene end: 29546333
  
Corresponding Affymetrix probe sets: Gga.2252.1.S1_s_at (Chicken Array)   GgaAffx.13136.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015909
NCBI entrez gene - 422441     See in Manteia.
RefSeq - NM_001008466
RefSeq Peptide - NP_001008466
swissprot - Q5ZHV1
Ensembl - ENSGALG00000009790
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab33baENSDARG00000052290Danio rerio
 Q9H082ENSG00000172007Homo sapiens
 O35963ENSMUSG00000027739Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB33A / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSGALG0000002404955
RAB35 / RAB35, member RAS oncogene family / Q15286* / Q6PHN9*ENSGALG0000000730836
RAB30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSGALG0000001724835
RAB43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSGALG0000000502135
RAB1B / RAB1A, member RAS oncogene family / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A *ENSGALG0000003158235
RAB19 / RAB19, member RAS oncogene family / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSGALG0000001285033
RAB26 / RAB26, member RAS oncogene family / Q504M8* / Q9ULW5*ENSGALG0000003241832
RAB40B / P0C0E4* / Q12829* / Q8WXH6* / RAB40A* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family* / RAB40B, member RAS oncogene family*ENSGALG0000000154529
RAB40C / RAB40C, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSGALG0000003048129
RAB37 / RAB37, member RAS oncogene family / Q96AX2*ENSGALG0000002778927


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0034067 protein localization to Golgi apparatus IEA
 biological_processGO:0048705 skeletal system morphogenesis IEA
 biological_processGO:1903358 regulation of Golgi organization IEA
 biological_processGO:1903434 negative regulation of constitutive secretory pathway IEA
 biological_processGO:2000156 regulation of retrograde vesicle-mediated transport, Golgi to ER IEA
 biological_processGO:2000785 regulation of autophagosome assembly IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005796 Golgi lumen IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002394 RGP1 / RGP1 homolog, RAB6A GEF complex partner 1 / Q8BHT7* / Q92546* / RAB6A-GEF complex partner protein 2 *  / complex / reaction
 ENSGALG00000015036 RIC1 / RIC1 homolog, RAB6A GEF complex partner 1 / Q4ADV7* / Q69ZJ7* / RAB6A-GEF complex partner protein 1 *  / reaction / complex






 

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