ENSGALG00000030481


Gallus gallus

Features
Gene ID: ENSGALG00000030481
  
Biological name :RAB40C
  
Synonyms : RAB40C / RAB40C, member RAS oncogene family
  
Possible biological names infered from orthology : Q8VHQ4 / Q96S21
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 13591690
Gene end: 13614123
  
Corresponding Affymetrix probe sets: Gga.11082.1.S1_at (Chicken Array)   Gga.7421.1.S1_at (Chicken Array)   GgaAffx.25353.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046492
NCBI entrez gene - 769960     See in Manteia.
RefSeq - NM_001172662
RefSeq Peptide - NP_001166133
swissprot - A0A1D5P1F5
Ensembl - ENSGALG00000030481
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab40cENSDARG00000061208Danio rerio
 Q96S21ENSG00000197562Homo sapiens
 Q8VHQ4ENSMUSG00000025730Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB40B / P0C0E4* / Q12829* / Q8WXH6* / RAB40A* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family* / RAB40B, member RAS oncogene family*ENSGALG0000000154581
RAB1B / RAB1A, member RAS oncogene family / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A *ENSGALG0000003158228
RAB43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSGALG0000000502125
RAB30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSGALG0000001724824
RAB35 / RAB35, member RAS oncogene family / Q15286* / Q6PHN9*ENSGALG0000000730824
RAB26 / RAB26, member RAS oncogene family / Q504M8* / Q9ULW5*ENSGALG0000003241824
RAB19 / RAB19, member RAS oncogene family / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSGALG0000001285024
RAB33B / Q5ZHV1 / Ras-related protein Rab-33B / Q9H082* / O35963* / RAB33B, member RAS oncogene family*ENSGALG0000000979023
RAB37 / RAB37, member RAS oncogene family / Q96AX2*ENSGALG0000002778922
RAB33A / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSGALG0000002404922


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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