ENSGALG00000005021


Gallus gallus

Features
Gene ID: ENSGALG00000005021
  
Biological name :RAB43
  
Synonyms : RAB43 / RAB43, member RAS oncogene family
  
Possible biological names infered from orthology : Q86YS6 / Q8CG50
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 5086637
Gene end: 5097777
  
Corresponding Affymetrix probe sets: GgaAffx.3126.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008024
NCBI entrez gene - 415970     See in Manteia.
RefSeq - NM_001277902
RefSeq - XM_015293064
RefSeq Peptide - NP_001264831
swissprot - F1P1G4
Ensembl - ENSGALG00000005021
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab43ENSDARG00000059404Danio rerio
 RAB43ENSG00000172780Homo sapiens
 Rab43ENSMUSG00000030055Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB19 / RAB19, member RAS oncogene family / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSGALG0000001285053
RAB30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSGALG0000001724846
RAB1B / RAB1A, member RAS oncogene family / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A *ENSGALG0000003158243
RAB26 / RAB26, member RAS oncogene family / Q504M8* / Q9ULW5*ENSGALG0000003241840
RAB35 / RAB35, member RAS oncogene family / Q15286* / Q6PHN9*ENSGALG0000000730837
RAB33B / Q5ZHV1 / Ras-related protein Rab-33B / Q9H082* / O35963* / RAB33B, member RAS oncogene family*ENSGALG0000000979037
RAB33A / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSGALG0000002404936
RAB40B / P0C0E4* / Q12829* / Q8WXH6* / RAB40A* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family* / RAB40B, member RAS oncogene family*ENSGALG0000000154535
RAB37 / RAB37, member RAS oncogene family / Q96AX2*ENSGALG0000002778934
RAB40C / RAB40C, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSGALG0000003048133


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0019068 virion assembly IEA
 biological_processGO:0035526 retrograde transport, plasma membrane to Golgi IEA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 biological_processGO:0090382 phagosome maturation IEA
 biological_processGO:1901998 toxin transport IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000035563 USP6NL / USP6 N-terminal-like protein / Q80XC3* / Q92738* / USP6 N-terminal like*  / complex / reaction






 

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