ENSGALG00000007308


Gallus gallus

Features
Gene ID: ENSGALG00000007308
  
Biological name :RAB35
  
Synonyms : RAB35 / RAB35, member RAS oncogene family
  
Possible biological names infered from orthology : Q15286 / Q6PHN9
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 9529237
Gene end: 9544591
  
Corresponding Affymetrix probe sets: Gga.16757.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011814
NCBI entrez gene - 416983     See in Manteia.
RefSeq - NM_001030669
RefSeq Peptide - NP_001025840
swissprot - Q5F4C5
Ensembl - ENSGALG00000007308
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01072548.1ENSDARG00000102078Danio rerio
 rab35bENSDARG00000058425Danio rerio
 RAB35ENSG00000111737Homo sapiens
 Rab35ENSMUSG00000029518Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB1B / RAB1A, member RAS oncogene family / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A *ENSGALG0000003158254
RAB30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSGALG0000001724842
RAB26 / RAB26, member RAS oncogene family / Q504M8* / Q9ULW5*ENSGALG0000003241842
RAB33A / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSGALG0000002404941
RAB33B / Q5ZHV1 / Ras-related protein Rab-33B / Q9H082* / O35963* / RAB33B, member RAS oncogene family*ENSGALG0000000979041
RAB19 / RAB19, member RAS oncogene family / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSGALG0000001285040
RAB43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSGALG0000000502140
RAB40B / P0C0E4* / Q12829* / Q8WXH6* / RAB40A* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family* / RAB40B, member RAS oncogene family*ENSGALG0000000154536
RAB37 / RAB37, member RAS oncogene family / Q96AX2*ENSGALG0000002778936
RAB40C / RAB40C, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSGALG0000003048134


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000281 mitotic cytokinesis IEA
 biological_processGO:0008104 protein localization IEA
 biological_processGO:0016197 endosomal transport IEA
 biological_processGO:0019882 antigen processing and presentation IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0032456 endocytic recycling IBA
 biological_processGO:0036010 protein localization to endosome IEA
 biological_processGO:0048227 plasma membrane to endosome transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0010008 endosome membrane IBA
 cellular_componentGO:0031253 cell projection membrane IEA
 cellular_componentGO:0045171 intercellular bridge IEA
 cellular_componentGO:0045334 clathrin-coated endocytic vesicle IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0019003 GDP binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002246 DENND1B / DENN domain containing 1B / Q3U1T9* / Q6P3S1* / DENN domain-containing protein 1B *  / reaction
 ENSGALG00000002661 YWHAE / Q5ZMT0 / 14-3-3 protein epsilon / P62259* / P62258* / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon* / tyrosine 3-monooxygenase/tryptophan 5-monoox...  / reaction






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr