ENSDARG00000058425


Danio rerio

Features
Gene ID: ENSDARG00000058425
  
Biological name :rab35b
  
Synonyms : rab35b / RAB35, member RAS oncogene family b
  
Possible biological names infered from orthology : Q15286 / Q6PHN9 / RAB35 / RAB35, member RAS oncogene family
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 3649036
Gene end: 3674915
  
Corresponding Affymetrix probe sets: Dr.14855.1.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000039450
swissprot - B8JLR8
ZFIN ID - ZDB-GENE-040801-62
Ensembl - ENSDARG00000058425
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB35ENSGALG00000007308Gallus gallus
 RAB35ENSG00000111737Homo sapiens
 Rab35ENSMUSG00000029518Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01072548.1 / RAB35* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000010207879
si:dkey-16l2.16ENSDARG0000003796772
rab1aa / RAB1A, member RAS oncogene family aENSDARG0000005226354
rab1ab / RAB1A, member RAS oncogene family b / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A * / RAB1A, member RAS oncogene family*ENSDARG0000002966354
zgc:171927 / RAB1B* / Q9D1G1* / Q9H0U4* / RAB1B, member RAS oncogene family*ENSDARG0000003305654
rab1bb / RAB1B, member RAS oncogene family bENSDARG0000005647953
rab1ba / zRAB1B, member RAS oncogene family aENSDARG0000005804453
zgc:101559ENSDARG0000000325741
rab33ba / RAB33B, member RAS oncogene family a / RAB33B* / O35963* / Q9H082* / RAB33B, member RAS oncogene family*ENSDARG0000005229041
rab30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSDARG0000003788441
rab33a / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSDARG0000005739440
rab43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSDARG0000005940440
rab40b / RAB40B, member RAS oncogene family / Q12829* / RAB40A* / Q8WXH6* / P0C0E4* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family*ENSDARG0000004241037
RAB19 (1 of many) / RAB19, member RAS oncogene family / RAB19* / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSDARG0000010115034
rab40c / RAB40c, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSDARG0000006120834
CABZ01072885.1 / RAB26* / Q9ULW5* / RAB26, member RAS oncogene family*ENSDARG0000010425931


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032456 endocytic recycling IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0010008 endosome membrane IBA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs
RAB geranylgeranylation
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr