ENSDARG00000037967


Danio rerio

Features
Gene ID: ENSDARG00000037967
  
Biological name :si:dkey-16l2.16
  
Synonyms : si:dkey-16l2.16
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 32661765
Gene end: 32669219
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000156271
Ensembl peptide - ENSDARP00000136434
NCBI entrez gene - 100003902     See in Manteia.
RefSeq - XM_001339291
RefSeq - XM_021471455
RefSeq - XM_021474295
swissprot - E7EY00
ZFIN ID - ZDB-GENE-141219-36
Ensembl - ENSDARG00000037967
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab35b / RAB35, member RAS oncogene family b / RAB35* / Q6PHN9* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000005842569
CABZ01072548.1 / RAB35* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000010207864
zgc:171927 / RAB1B* / Q9D1G1* / Q9H0U4* / RAB1B, member RAS oncogene family*ENSDARG0000003305654
rab1ab / RAB1A, member RAS oncogene family b / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A * / RAB1A, member RAS oncogene family*ENSDARG0000002966352
rab1aa / RAB1A, member RAS oncogene family aENSDARG0000005226351
rab1ba / zRAB1B, member RAS oncogene family aENSDARG0000005804451
rab1bb / RAB1B, member RAS oncogene family bENSDARG0000005647951
rab33ba / RAB33B, member RAS oncogene family a / RAB33B* / O35963* / Q9H082* / RAB33B, member RAS oncogene family*ENSDARG0000005229040
rab30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSDARG0000003788440
rab33a / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSDARG0000005739439
rab43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSDARG0000005940438
rab40b / RAB40B, member RAS oncogene family / Q12829* / RAB40A* / Q8WXH6* / P0C0E4* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family*ENSDARG0000004241037
zgc:101559ENSDARG0000000325737
rab40c / RAB40c, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSDARG0000006120834
RAB19 (1 of many) / RAB19, member RAS oncogene family / RAB19* / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSDARG0000010115034
CABZ01072885.1 / RAB26* / Q9ULW5* / RAB26, member RAS oncogene family*ENSDARG0000010425932


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032456 endocytic recycling IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0010008 endosome membrane IBA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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