ENSDARG00000052290


Danio rerio

Features
Gene ID: ENSDARG00000052290
  
Biological name :rab33ba
  
Synonyms : rab33ba / RAB33B, member RAS oncogene family a
  
Possible biological names infered from orthology : O35963 / Q9H082 / RAB33B / RAB33B, member RAS oncogene family
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 46177524
Gene end: 46189621
  
Corresponding Affymetrix probe sets: Dr.14605.1.A1_at (Zebrafish Array)   Dr.6608.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000068605
NCBI entrez gene - 572060     See in Manteia.
swissprot - Q498P3
ZFIN ID - ZDB-GENE-050809-122
Ensembl - ENSDARG00000052290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5ZHV1ENSGALG00000009790Gallus gallus
 Q9H082ENSG00000172007Homo sapiens
 O35963ENSMUSG00000027739Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab33a / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSDARG0000005739455
zgc:101559ENSDARG0000000325753
rab30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSDARG0000003788437
rab1aa / RAB1A, member RAS oncogene family aENSDARG0000005226335
si:dkey-16l2.16ENSDARG0000003796735
rab1ba / zRAB1B, member RAS oncogene family aENSDARG0000005804434
rab1ab / RAB1A, member RAS oncogene family b / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A * / RAB1A, member RAS oncogene family*ENSDARG0000002966334
rab35b / RAB35, member RAS oncogene family b / RAB35* / Q6PHN9* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000005842534
rab1bb / RAB1B, member RAS oncogene family bENSDARG0000005647934
rab43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSDARG0000005940433
zgc:171927 / RAB1B* / Q9D1G1* / Q9H0U4* / RAB1B, member RAS oncogene family*ENSDARG0000003305633
CABZ01072548.1 / RAB35* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000010207833
RAB19 (1 of many) / RAB19, member RAS oncogene family / RAB19* / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSDARG0000010115030
rab40b / RAB40B, member RAS oncogene family / Q12829* / RAB40A* / Q8WXH6* / P0C0E4* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family*ENSDARG0000004241027
rab40c / RAB40c, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSDARG0000006120827
CABZ01072885.1 / RAB26* / Q9ULW5* / RAB26, member RAS oncogene family*ENSDARG0000010425926


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:2000785 regulation of autophagosome assembly IBA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
TBC/RABGAPs
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000006545 rgp1 / GP1 homolog, RAB6A GEF complex partner 1 / Q92546* / Q8BHT7* / RAB6A-GEF complex partner protein 2 * / RGP1 homolog, RAB6A GEF complex partner 1*  / reaction / complex






 

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