ENSMUSG00000027739


Mus musculus

Features
Gene ID: ENSMUSG00000027739
  
Biological name :Rab33b
  
Synonyms : O35963 / Rab33b / RAB33B, member RAS oncogene family
  
Possible biological names infered from orthology : Q9H082
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: C
Gene start: 51483920
Gene end: 51496232
  
Corresponding Affymetrix probe sets: 10491945 (MoGene1.0st)   1423083_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142215
Ensembl peptide - ENSMUSP00000063054
NCBI entrez gene - 19338     See in Manteia.
MGI - MGI:1330805
RefSeq - NM_016858
RefSeq Peptide - NP_058554
swissprot - A0A0A6YY00
swissprot - O35963
swissprot - Q0PD21
Ensembl - ENSMUSG00000027739
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab33baENSDARG00000052290Danio rerio
 Q5ZHV1ENSGALG00000009790Gallus gallus
 Q9H082ENSG00000172007Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P97950 / Rab33a / RAB33A, member RAS oncogene family / Q14088*ENSMUSG0000003110456
Rab35 / Q6PHN9 / RAB35, member RAS oncogene family / Q15286*ENSMUSG0000002951836
Rab30 / Q923S9 / RAB30, member RAS oncogene family / Q15771*ENSMUSG0000003064335
Rab1b / Q9D1G1 / RAB1B, member RAS oncogene family / Q9H0U4*ENSMUSG0000002487034
Rab19 / P35294 / Ras-related protein Rab-19 / A4D1S5* / RAB19, member RAS oncogene family*ENSMUSG0000002992334
Rab43 / Q8CG50 / RAB43, member RAS oncogene family / Q86YS6*ENSMUSG0000003005534
Rab1 / P62821 / Ras-related protein Rab-1A / RAB1A* / P62820* / RAB1A, member RAS oncogene family*ENSMUSG0000002014934
Rab26 / Q504M8 / RAB26, member RAS oncogene family / Q9ULW5*ENSMUSG0000007965733
Rab37 / RAB37, member RAS oncogene family / Q96AX2*ENSMUSG0000002073231
Q8VHQ4 / Rab40c / Rab40C, member RAS oncogene family / Q96S21*ENSMUSG0000002573029
Rab40b / Rab40B, member RAS oncogene family / Q12829* / RAB40A* / Q8WXH6* / P0C0E4* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family*ENSMUSG0000002517029


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IMP
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0034067 protein localization to Golgi apparatus IEA
 biological_processGO:0048705 skeletal system morphogenesis IEA
 biological_processGO:1903358 regulation of Golgi organization IEA
 biological_processGO:1903434 negative regulation of constitutive secretory pathway IEA
 biological_processGO:2000156 regulation of retrograde vesicle-mediated transport, Golgi to ER IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005796 Golgi lumen IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
TBC/RABGAPs
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000028468 Rgp1 / Q8BHT7 / RAB6A-GEF complex partner protein 2 / Q92546* / RGP1 homolog, RAB6A GEF complex partner 1*  / reaction / complex
 ENSMUSG00000038658 Ric1 / Q69ZJ7 / RAB6A-GEF complex partner protein 1 / Q4ADV7* / RIC1 homolog, RAB6A GEF complex partner 1*  / reaction / complex






 

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