ENSMUSG00000030643


Mus musculus

Features
Gene ID: ENSMUSG00000030643
  
Biological name :Rab30
  
Synonyms : Q923S9 / Rab30 / RAB30, member RAS oncogene family
  
Possible biological names infered from orthology : Q15771
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: E1
Gene start: 92741603
Gene end: 92844535
  
Corresponding Affymetrix probe sets: 10554938 (MoGene1.0st)   1426452_a_at (Mouse Genome 430 2.0 Array)   1438313_at (Mouse Genome 430 2.0 Array)   1440325_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000102798
Ensembl peptide - ENSMUSP00000146581
Ensembl peptide - ENSMUSP00000032879
Ensembl peptide - ENSMUSP00000102797
NCBI entrez gene - 75985     See in Manteia.
MGI - MGI:1923235
RefSeq - NM_029494
RefSeq - XM_006508293
RefSeq - XM_006508294
RefSeq Peptide - NP_083770
swissprot - Q0PD24
swissprot - A0A140LHW9
swissprot - D3YV16
swissprot - Q923S9
Ensembl - ENSMUSG00000030643
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab30ENSDARG00000037884Danio rerio
 RAB30ENSGALG00000017248Gallus gallus
 RAB30ENSG00000137502Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rab43 / Q8CG50 / RAB43, member RAS oncogene family / Q86YS6*ENSMUSG0000003005549
Rab19 / P35294 / Ras-related protein Rab-19 / A4D1S5* / RAB19, member RAS oncogene family*ENSMUSG0000002992345
P97950 / Rab33a / RAB33A, member RAS oncogene family / Q14088*ENSMUSG0000003110444
Rab1 / P62821 / Ras-related protein Rab-1A / RAB1A* / P62820* / RAB1A, member RAS oncogene family*ENSMUSG0000002014943
Rab35 / Q6PHN9 / RAB35, member RAS oncogene family / Q15286*ENSMUSG0000002951842
Rab1b / Q9D1G1 / RAB1B, member RAS oncogene family / Q9H0U4*ENSMUSG0000002487042
Rab37 / RAB37, member RAS oncogene family / Q96AX2*ENSMUSG0000002073240
O35963 / Rab33b / RAB33B, member RAS oncogene family / Q9H082*ENSMUSG0000002773940
Rab26 / Q504M8 / RAB26, member RAS oncogene family / Q9ULW5*ENSMUSG0000007965739
Q8VHQ4 / Rab40c / Rab40C, member RAS oncogene family / Q96S21*ENSMUSG0000002573033
Rab40b / Rab40B, member RAS oncogene family / Q12829* / RAB40A* / Q8WXH6* / P0C0E4* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family*ENSMUSG0000002517032


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007030 Golgi organization ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005801 cis-Golgi network ISS
 cellular_componentGO:0005802 trans-Golgi network ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031985 Golgi cisterna ISS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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