ENSMUSG00000025170


Mus musculus

Features
Gene ID: ENSMUSG00000025170
  
Biological name :Rab40b
  
Synonyms : Rab40b / Rab40B, member RAS oncogene family
  
Possible biological names infered from orthology : P0C0E4 / Q12829 / Q8WXH6 / RAB40A / RAB40AL / RAB40A like / RAB40A, member RAS oncogene family
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: E2
Gene start: 121356125
Gene end: 121388251
  
Corresponding Affymetrix probe sets: 10394109 (MoGene1.0st)   1425756_at (Mouse Genome 430 2.0 Array)   1436566_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000101713
NCBI entrez gene - 217371     See in Manteia.
MGI - MGI:2183451
RefSeq - NM_139147
RefSeq Peptide - NP_631886
swissprot - B1ATT4
Ensembl - ENSMUSG00000025170
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab40bENSDARG00000042410Danio rerio
 RAB40BENSGALG00000001545Gallus gallus
 P0C0E4ENSG00000102128Homo sapiens
 Q12829ENSG00000141542Homo sapiens
 Q8WXH6ENSG00000172476Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8VHQ4 / Rab40c / Rab40C, member RAS oncogene family / Q96S21*ENSMUSG0000002573078
Rab1 / P62821 / Ras-related protein Rab-1A / RAB1A* / P62820* / RAB1A, member RAS oncogene family*ENSMUSG0000002014928
Rab26 / Q504M8 / RAB26, member RAS oncogene family / Q9ULW5*ENSMUSG0000007965728
Rab1b / Q9D1G1 / RAB1B, member RAS oncogene family / Q9H0U4*ENSMUSG0000002487027
Rab43 / Q8CG50 / RAB43, member RAS oncogene family / Q86YS6*ENSMUSG0000003005527
Rab37 / RAB37, member RAS oncogene family / Q96AX2*ENSMUSG0000002073227
Rab35 / Q6PHN9 / RAB35, member RAS oncogene family / Q15286*ENSMUSG0000002951825
Rab19 / P35294 / Ras-related protein Rab-19 / A4D1S5* / RAB19, member RAS oncogene family*ENSMUSG0000002992324
O35963 / Rab33b / RAB33B, member RAS oncogene family / Q9H082*ENSMUSG0000002773924
Rab30 / Q923S9 / RAB30, member RAS oncogene family / Q15771*ENSMUSG0000003064323
P97950 / Rab33a / RAB33A, member RAS oncogene family / Q14088*ENSMUSG0000003110423


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036036  SOCS box-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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