ENSG00000137502


Homo sapiens

Features
Gene ID: ENSG00000137502
  
Biological name :RAB30
  
Synonyms : Q15771 / RAB30 / RAB30, member RAS oncogene family
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q14.1
Gene start: 82973133
Gene end: 83071923
  
Corresponding Affymetrix probe sets: 206530_at (Human Genome U133 Plus 2.0 Array)   227842_at (Human Genome U133 Plus 2.0 Array)   228003_at (Human Genome U133 Plus 2.0 Array)   228390_at (Human Genome U133 Plus 2.0 Array)   229072_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000433243
Ensembl peptide - ENSP00000478702
Ensembl peptide - ENSP00000437235
Ensembl peptide - ENSP00000436587
Ensembl peptide - ENSP00000436282
Ensembl peptide - ENSP00000435542
Ensembl peptide - ENSP00000435189
Ensembl peptide - ENSP00000435089
Ensembl peptide - ENSP00000434974
Ensembl peptide - ENSP00000434953
Ensembl peptide - ENSP00000434528
Ensembl peptide - ENSP00000434106
Ensembl peptide - ENSP00000433832
Ensembl peptide - ENSP00000260056
Ensembl peptide - ENSP00000432193
Ensembl peptide - ENSP00000432336
NCBI entrez gene - 27314     See in Manteia.
OMIM - 605693
RefSeq - NM_001286060
RefSeq - NM_001286061
RefSeq - NM_014488
RefSeq - NM_001286059
RefSeq Peptide - NP_001272989
RefSeq Peptide - NP_001272990
RefSeq Peptide - NP_055303
RefSeq Peptide - NP_001272988
swissprot - E9PI18
swissprot - A8K5R1
swissprot - H0YDK7
swissprot - E9PS06
swissprot - Q15771
swissprot - E9PRX0
swissprot - E9PRF7
swissprot - E9PQ07
swissprot - E9PPW9
swissprot - E9PNB9
swissprot - E9PMJ1
swissprot - E9PLM3
swissprot - E9PJQ5
Ensembl - ENSG00000137502
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab30ENSDARG00000037884Danio rerio
 RAB30ENSGALG00000017248Gallus gallus
 Rab30ENSMUSG00000030643Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB43 / Q86YS6 / RAB43, member RAS oncogene familyENSG0000017278052
RAB19 / A4D1S5 / RAB19, member RAS oncogene familyENSG0000014695546
Q14088 / RAB33A / RAB33A, member RAS oncogene familyENSG0000013459444
RAB1A / P62820 / RAB1A, member RAS oncogene familyENSG0000013806943
RAB35 / Q15286 / RAB35, member RAS oncogene familyENSG0000011173742
RAB1B / Q9H0U4 / RAB1B, member RAS oncogene familyENSG0000017490342
Q9H082 / RAB33B / RAB33B, member RAS oncogene familyENSG0000017200740
RAB37 / Q96AX2 / RAB37, member RAS oncogene familyENSG0000017279439
RAB26 / Q9ULW5 / RAB26, member RAS oncogene familyENSG0000016796439
Q96S21 / RAB40C / RAB40C, member RAS oncogene familyENSG0000019756233
Q12829 / RAB40B / RAB40B, member RAS oncogene familyENSG0000014154232
Q8WXH6 / RAB40A / RAB40A, member RAS oncogene familyENSG0000017247631
P0C0E4 / RAB40AL / RAB40A likeENSG0000010212831


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007030 Golgi organization IMP
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005795 Golgi stack TAS
 cellular_componentGO:0005801 cis-Golgi network IDA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031985 Golgi cisterna IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity TAS
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr